| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_10338 |
|---|
| Symbol | |
|---|
| ID | 9297557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 2255038 |
|---|
| End bp | 2261520 |
|---|
| Gene Length | 6483 bp |
|---|
| Protein Length | 2160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | probable extracellular nuclease |
|---|
| Protein accession | YP_003716813 |
|---|
| Protein GI | 298208634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGTTG CTGGCCTATC TTTTGGTCAA ATTGTAACAA ACGGCGATGA TGCTGGACCA
GGTTCCTTAC GAGACGCAGT TGCTCAAGCT AACGCAAATG CAGGAGCAGA CGTTATTACA
TTTAATGGAA ACTTTACAGT AAACCTAACT TCTGGAGAGA TATTAGTTAC AGATGATGTA
ACAATTACAG GAAATGGTAC TGGTAATACA ATTATTGATG GTTCTTCCAA TTCTGGAAGA
ATTTTTAATT TTCAGATGGA TGGTGGCATT ATTGCAGGAG CATCCTCAAC ACTAGATGCA
ATCACTATTC AAAACGGTTC AATTACAGGA ACAGCAGATG GTGGTGGTGC TATATTTGTA
TCAGCTAATG ATATTGTAGC TCCTAGTTCT TTAACTATAG TAAATTGTGA TTTTAATAAC
AATTCCACAG AATCAGATAC GTCTGGTGAT GGCGGTGGTG GTGCAATTTA TGCTTCAGAT
GTTTCACTAG ATATTACAGG AACTGAATTT AATAATAACA TAGCAACTGC TGCTTCTGGT
AGTGGTGGAG CAATTTATTA TGAGTCTCAA AGTGTTTTAA CAACATTCTC TTTAGTAAAT
TCAGATTTAA CAGGAAACAT TGCTGGTCGT GCTGGTGGTG CGATTGAAAC TAATACACCT
AATGTATTAA CAATTACTAA CGTAACTTTT GATGGTAACC AAGCAACTGG TACACCTGGT
AATGGTGGAG CGTTACATAA TACAGGTATA AGTGATACAA ACGTAACAGG TTCTACTTTT
ATAAATAATA TTGCAGGATC AGAAGGTGGA GCATTATGGA ATCAAGCTGG CGGAACAATG
ACCGTAAATG CCTCAACTGT AACTGGTAAT GAAGCACAAG GAAACGATAG CTCTAACGGT
GGTGGAGGTT TATTCAACAA CGGTGGTACT TTAATAGTTT CTGGCGCAAC TTTAGTAAAT
AATAATTCTG CTACAGGAAC TTCTGGTTCT GGTGGTGGTA TTTTAAGTAC AGATGGAGAT
GTTACAGTTA CAGATCCAAA TACTACAGTA AATAGTAACA TAGCAAACCG TGCTGGTGGT
GGTATCGAAA TAATAGATGG GTCACTTACA TTACAAGATG TCTCACTTAA TAGTAATAAT
GCTGGTGTTG CACCAAATGC TTCAGCAAGT CCAGGTAATG GTGGTGGTTT ACACGTTTCC
GGAATTGCTA CTATTATAAT TAATGGAGGT AATATTCAAG GAAATATAGC AGCTAACGAA
GGTGGTGGAC TATGGAATCA ACTTGGAAGT ACAATGACAG TAGGAAATAC ACCAACACCT
AATTTCTCAG ATAATATCGC AAGTGGAGAT GCGCCTACTA CAGGTGGTGG TGCAATATTC
AACAATGGTG GAGACCTTAT AGTATTAGCA GGAAATAATA TAGTCAATAA TCTTGCAGAT
GGTGTTTCAG GTTCTGGTGG AGCTATTTTA AGTAATGGAG GTACTGTAAC AATTACTGAA
ACAACATTCA CTAATAACGT ATCTACACGT GCTGGTGGTG CTATAGAACA TACTGGCGGA
ACCCTTAATT TAACAGGTGT AAATTTTGAC AGTAATAATG TTGGTGTTAC ATCTCCTTTA
AATTCTAATC CTGGTAATGG AGGTGCTTTA CACGTAGGTG GTGATGCAAC TACTAATATT
ACAGGTGGTT CAGTTATTAA TAACCAAGCT GCTAATGAAG GTGGTGGATT ATGGAATGGC
TCTGGCATAA TGACAATTAT TGATGTTGTT ATTGATGGAA ACAGTGCTCA TAGTGCTGCT
GCAGCAACAT CTGGCGGTGG TGGTATCTAC AATGAAGGAG GTACTGTAAC AACAGATGCT
ACGACACAAA TAATAAATAA CATTGCTACA GTAGGACCTT CTGGTTCTGG TGGTGGTATT
TTAAATGCAG GTGGAACATT TACTGCTACA GGAACAACAA TTACTAATAA TACAGCAAAT
AGAGCTGGTG GTGGTATTGA AGCAAATAAT ACAGATTCAG GAAGTGTACC AGGTATTGTA
AATTTAACTA ATGTAACATT AGATAATAAC AATGCTGGTG GTGTTGCTCC TGCTCCTGGA
AACGGTGGCG GACTACACGT AAGTGGGTCT AGTGCTATTA ACATTACAGG AGGAACCGTA
AGTGGAAACA CAGCTTCCAA AGAAGGTGGC GGACTATGGA ACAACCAAGG TGTGATGACT
ATCACCGGAA CAACTATAGA TGGTAACGAT GCGCAGGGAG ACCTTGTTGC AGATCCATTG
GAAATTGTAG GTGGTGGAGG AATCTTCGCT GAGGATGGAG CCGGATCGGT TGTCATCGGA
GCGGGAACGA TCATCTCGAA CAACTTCGCC TCAGGAACAC AAGGTTCTGG AGGAGGAATC
CTTATGGCTA CAGGAACTAC ATTGTCAATA GACGGTAGTG CAGGAGCTGT AATGATCACA
GGAAACTCTG CAAGCAGAGC AGGTGGTGGA TTGGAGGACT GGTCTCTAGA CACGAACACC
AACACATTGA CCAACGTTGT GTTTATGAAC AACACGGCAG GCTTGGATGC AGGAGCATTC
ACGGCAGATG GCGGTCCAGG AAACGGAGGA GCAATCCACG TTACGGGTCC AGGAAACAAT
ACGATCACAG ACGGATCTGC TTCAGGAAAC CTTGCTGCCA ATGAAGGTGG TGGATTCTGG
AACGGATCAG GAGTAATGAC GATAGTAAAC ACCGTAATAG ATGCGAACAC TGCCTCTGGT
AGTGATGCTG CTGTAGCAGG TGCTGCAGGT GGTGGAGGAA TATTCAATGA AGGAGGAACT
GTGGATATCT CAGGAACAGC TTCAGTGACC AACAACATCG CAGATGGTGC ACAGTCAACT
GGTGGTGGTA TCTTGAATGC TTCAGGAATA CTGACAGCAA ATGGAACAAC AATAACAGGA
AACCAATCCA ACAGAGCTGG TGGTGGTATT GAGACCAATG GTTCAAGTTC AGTGACACTT
ACAGATGTTG CTTTAGATGG AAATATGACA GGTGTGGTAA CCGGTCCTGG TGCTCCAGGA
AATGGTGGTG GACTTCACGT AAGTGGAGCA GCACCAGTAA CAATCACAGG AGGAACCGTA
AGTGGAAACA CAGCTTCCAA AGAAGGTGGC GGACTATGGA ACAACCAAGG TGTGATGACT
ATCACCGGAA CAACTATAGA TGGTAACGAT GCGCAGGGAG ACCTTGTTGC AGATCCATTG
GAGATTGTAG GTGGTGGAGG AATCTTTGCT GAGGATGGAG CCGGATCGGT TGTCATCGGA
GCTGGAACGA TCATCTCGAA CAACTTCGCC TCAGGGACGC AAGGTTCTGG AGGAGGAATC
CTTATGGCTA CAGGAACTAC ATTGTCAATA GACGGTAGTG CAGGAGCTGT AATGATCACA
GGAAACTCTG CAAGCAGAGC AGGTGGTGGA TTGGAGGACT GGTCTTTAGA CACGAATACC
AACACATTGA CCAACGTTGT GTTTATGAAC AACACGGCAG GCTTGGATGC AGGAGCATTC
ACGGCAGATG GTGGTCCAGG AAATGGAGGG GCAATCCACG TTACGGGTCC AGGAAACAAT
ACGATCACAG ACGGATCTGC ATCAGGAAAC CTTGCTGCCA ATGAAGGCGG TGGATTCTGG
AACGGATCAG GAGTAATGAC GATAGTAAAC ACCGTAATAG ATGCAAACAC TGCCTCTGGT
AGTGATGCTG CTGTAGCAGG TGCTGCAGGT GGTGGAGGAA TATTCAATGA AGGAGGAACT
GTGGATATCT CAGGAACAGC TTCAGTGACC AACAACATCG CAGATGGTGC ACAGTCAACT
GGTGGTGGTA TCTTGAATGC AGCCGGAACA TTGACTGCAA ACGGTACAAC AATCACAGGA
AACCAATCTA ACAGAGCTGG TGGCGGAATC GAGACTAACG GAAGTGGTCC TGTAACCCTT
ACTGATGTTA CTTTGGATGC TAACCAAACA GGAGTTGTAA CAGGAACAGG AGCTCCAGGA
AACGGTGGTG GTATCCACGT TAGTGGGGAC AGTGCTGTAA CAATCACTGG AGGAACCTCA
AATGGGAATA CGGCTGCCAA TGAAGGTGGT GCACTTTGGA ACGGTTCAGG AGTAATGACA
ATCGTAGACA CTACTATAGA TGCCAACACG GCATCTGGTA ATGATGCAAT GTCTCCAGGA
GCTGCCGGTG GTGGCGGAAT CTATAATGAA GGAGGAACTG TGGATATCTC AGGAACAGCT
TCAGTGACCA ACAACATCGC AGATGGTGCA CAGTCAACTG GTGGTGGTAT CTTGAATGCT
TCAGGAATAC TGACAGCAAA TGGAACAACA ATAACAGGAA ACCAATCCAA CAGAGCTGGT
GGTGGTATTG AGACCAATGG TTCAAGTTCA GTGACACTTA CAGATGTTGC TTTAGATGGA
AATATGACAG GTGTGGTAAC CGGTCCTGGT GCTCCAGGAA ATGGTGGTGG ACTTCACGTA
AGTGGAGCAG CACCAGTAAC AATCACAGGA GGAACCGTAA GTGGAAACAC AGCTTCCAAA
GAAGGTGGCG GACTATGGAA CAACCAAGGT GTGATGACTA TCACCGGAAC AACTATAGAT
GGTAACGATG CGCAGGGAGA CCTTGTTGCA GATCCATTGG AGATTGTAGG TGGTGGAGGA
ATCTTTGCTG AGGATGGAGC CGGATCGGTT GTCATCGGAG CTGGAACGAT CATCTCGAAC
AACTTCGCCT CAGGGACGCA AGGTTCTGGA GGAGGAATCC TTATGGCTAC AGGAACTACA
TTGTCAATAG ACGGTAGTGC AGGAGCTGTA ATGATCACAG GAAACTCTGC AAGCAGAGCA
GGTGGTGGAT TGGAGGACTG GTCTTTAGAC ACGAATACCA ACACATTGAC CAACGTTGTG
TTTATGAACA ACACGGCAGG CTTGGATGCA GGAGCATTCA CGGCAGATGG TGGTCCAGGA
AATGGAGGAG CAATCCACGT TACGGGTCCA GGAAACAATA CAATCACAGA CGGATCTGCT
TCAGGAAACT TAGCAGCAGC TGAAGGTGGT GCGTTTTGGA ATGGGTCTGG AACAATGTTA
GTTACTGGAA CTTCATTTGA TTCAAATATT GCAAGTGGAG CAGACGCAAC CAATGGTGGT
GGTGCTTTGT TTAATATCGG AGGTACACTT ACTGTATCTG GTGCTTCAAT TACAAATAAC
GTAGTTGATG GAACATCAGG TTCTGGTGGT GGTATTTTAA ATGTAAATGG TGGTATACTT
TCTGTTACAG ATACTGATAT TTTAGGGAAC TCTGCATCTC GTGCAGGTGG AGGAATCGAA
GATAACTCTA CTGTTGATTT AGGTGATGGC GCATTAGTAG GATCTGTAAC TTTATTTGGT
GTTCAGCTTA ATAACAATAT TGCTGGAAGT GCACCAGGAA ATGGAGGTGG TTTACACCTT
ACAGGTGGTG CAGACTCTAA CATTACAAGT AGTGTTATTA ATGGTAATAC AGCATCTAAT
GAAGGTGGTG GTGTTTGGAA TGGATCTGGA GTTATGACAA TTTCATTAAC TACTATTGAT
GGTAATACAG CCAACGGCGC TGCAGCTACT AATGGTGGTG GCGGAATATT CAACAATGCT
TCAGGAACTA TAAATTTAAA TACATCAACA GTATCTAATA ATGTTTCAAC TGGTGCAGCT
GCTCAAGGTG GTGGTATACA TAACAAAGCT ACTACAACGC TTAATGTTAC AGCAAGTACT
ATTTCAGGAA ACACTTCGGC ATCTAATGGT GGAGGAATTT ATAACAACGG AACAGCATCT
ATACTAAATG CTACTATTGC AAATAATACT GCTACTGCAA ACGGTGGTGG TGTATCTGGA
GAGTCTTCTG TTACAGTTAA AGGTTCAATT ATAGCCACAA ATACTGCCGC TACAGGAACA
GATGTAGATG GTACTTTTGT TTCAAACGAC TATAATTTAA TAGGTGATGA TAGCGGTAAT
GCTTTCCCAG AGTCTGCAAA TGATATTGAG AATGTGAACC CAGCAATTGG GCCATTAGCA
GATAACGGTG GTACTACATT AACTCATATG TTATTGAGTA CTAGTGCTGC AGCAAATGCT
GGAGATCCAG GAGATACTTC TTTAGATCAA ATAGGAAATG CAGTTTTCGG TGATGCTAGA
GACATAGGAG CACTTGAAGA CCAAGATGCC TTAGGTGTAG AAGATTTTGG TAACTCGCTT
AGCGATACAG TGCTTTTCCC AAATCCTTCA ACTAATGGAA ATGTTAGTTT AAACATTCCT
ACTAATATTA CAAATACAGT AACTATTAGA GTGATAGATA TGACAGGAAA GCAAGTACAC
TCACAACAAG CTACCTCTGG ATCAGTAACT CTTAACTTAA ATAGGTTAGC AGTTGGTACT
TACTTGGTAA ATATTTCTGA TGGAAATACA AGTAGCACTT TAAAACTGTT AATGAGTAGA
TAA
|
|---|
| Protein sequence | MFVAGLSFGQ IVTNGDDAGP GSLRDAVAQA NANAGADVIT FNGNFTVNLT SGEILVTDDV
TITGNGTGNT IIDGSSNSGR IFNFQMDGGI IAGASSTLDA ITIQNGSITG TADGGGAIFV
SANDIVAPSS LTIVNCDFNN NSTESDTSGD GGGGAIYASD VSLDITGTEF NNNIATAASG
SGGAIYYESQ SVLTTFSLVN SDLTGNIAGR AGGAIETNTP NVLTITNVTF DGNQATGTPG
NGGALHNTGI SDTNVTGSTF INNIAGSEGG ALWNQAGGTM TVNASTVTGN EAQGNDSSNG
GGGLFNNGGT LIVSGATLVN NNSATGTSGS GGGILSTDGD VTVTDPNTTV NSNIANRAGG
GIEIIDGSLT LQDVSLNSNN AGVAPNASAS PGNGGGLHVS GIATIIINGG NIQGNIAANE
GGGLWNQLGS TMTVGNTPTP NFSDNIASGD APTTGGGAIF NNGGDLIVLA GNNIVNNLAD
GVSGSGGAIL SNGGTVTITE TTFTNNVSTR AGGAIEHTGG TLNLTGVNFD SNNVGVTSPL
NSNPGNGGAL HVGGDATTNI TGGSVINNQA ANEGGGLWNG SGIMTIIDVV IDGNSAHSAA
AATSGGGGIY NEGGTVTTDA TTQIINNIAT VGPSGSGGGI LNAGGTFTAT GTTITNNTAN
RAGGGIEANN TDSGSVPGIV NLTNVTLDNN NAGGVAPAPG NGGGLHVSGS SAINITGGTV
SGNTASKEGG GLWNNQGVMT ITGTTIDGND AQGDLVADPL EIVGGGGIFA EDGAGSVVIG
AGTIISNNFA SGTQGSGGGI LMATGTTLSI DGSAGAVMIT GNSASRAGGG LEDWSLDTNT
NTLTNVVFMN NTAGLDAGAF TADGGPGNGG AIHVTGPGNN TITDGSASGN LAANEGGGFW
NGSGVMTIVN TVIDANTASG SDAAVAGAAG GGGIFNEGGT VDISGTASVT NNIADGAQST
GGGILNASGI LTANGTTITG NQSNRAGGGI ETNGSSSVTL TDVALDGNMT GVVTGPGAPG
NGGGLHVSGA APVTITGGTV SGNTASKEGG GLWNNQGVMT ITGTTIDGND AQGDLVADPL
EIVGGGGIFA EDGAGSVVIG AGTIISNNFA SGTQGSGGGI LMATGTTLSI DGSAGAVMIT
GNSASRAGGG LEDWSLDTNT NTLTNVVFMN NTAGLDAGAF TADGGPGNGG AIHVTGPGNN
TITDGSASGN LAANEGGGFW NGSGVMTIVN TVIDANTASG SDAAVAGAAG GGGIFNEGGT
VDISGTASVT NNIADGAQST GGGILNAAGT LTANGTTITG NQSNRAGGGI ETNGSGPVTL
TDVTLDANQT GVVTGTGAPG NGGGIHVSGD SAVTITGGTS NGNTAANEGG ALWNGSGVMT
IVDTTIDANT ASGNDAMSPG AAGGGGIYNE GGTVDISGTA SVTNNIADGA QSTGGGILNA
SGILTANGTT ITGNQSNRAG GGIETNGSSS VTLTDVALDG NMTGVVTGPG APGNGGGLHV
SGAAPVTITG GTVSGNTASK EGGGLWNNQG VMTITGTTID GNDAQGDLVA DPLEIVGGGG
IFAEDGAGSV VIGAGTIISN NFASGTQGSG GGILMATGTT LSIDGSAGAV MITGNSASRA
GGGLEDWSLD TNTNTLTNVV FMNNTAGLDA GAFTADGGPG NGGAIHVTGP GNNTITDGSA
SGNLAAAEGG AFWNGSGTML VTGTSFDSNI ASGADATNGG GALFNIGGTL TVSGASITNN
VVDGTSGSGG GILNVNGGIL SVTDTDILGN SASRAGGGIE DNSTVDLGDG ALVGSVTLFG
VQLNNNIAGS APGNGGGLHL TGGADSNITS SVINGNTASN EGGGVWNGSG VMTISLTTID
GNTANGAAAT NGGGGIFNNA SGTINLNTST VSNNVSTGAA AQGGGIHNKA TTTLNVTAST
ISGNTSASNG GGIYNNGTAS ILNATIANNT ATANGGGVSG ESSVTVKGSI IATNTAATGT
DVDGTFVSND YNLIGDDSGN AFPESANDIE NVNPAIGPLA DNGGTTLTHM LLSTSAAANA
GDPGDTSLDQ IGNAVFGDAR DIGALEDQDA LGVEDFGNSL SDTVLFPNPS TNGNVSLNIP
TNITNTVTIR VIDMTGKQVH SQQATSGSVT LNLNRLAVGT YLVNISDGNT SSTLKLLMSR
|
|---|
| |