| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_09893 |
|---|
| Symbol | |
|---|
| ID | 9297467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 2163307 |
|---|
| End bp | 2165757 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent protease |
|---|
| Protein accession | YP_003716724 |
|---|
| Protein GI | 298208545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAA CAAAGTTTAC AGATATTGAC AGTTTGTCAT TGCAGGATTT AGAACAAGAT
GCCGAGTTAA TTCCATTAAT GACGCCTGAA GATGAAGAAG AAATTAATAA AGAAAAATTA
CCTGAGACCT TACCAATTTT ACCGCTTAGA AATACGGTGT TATTTCCTGG TGTAGTAATT
CCTATTACTG CAGGACGCGA TAAATCTATC AAGCTAATAC AAGATGCTAA TAATGGTAGC
AAGGTAGTTG GTGTTGTATC TCAAAAAAGT GAAGAGGTAG AGAACCCAAC TGGAAAAGAC
ATAAATACAC TTGGTGTAGT TGCCAGAATC CTTAGGGTTT TAAAAATGCC AGATGGTAAT
ACTACTGTAA TTATACAAGG TAAAAAGCGT TTTGAGATAG ATGAGGTTAT AACTGAAGAT
CCTTATTTAC AAGCAACTAT TAAGGAAGTT CCAGAAGCTA GACCTGAAAA GGAAAATGAA
GAGTTTTCTG CTATTGTAGA TTCTATTAAA GAATTAGCAC TTAAGATTAT AAAGCAAAGT
CCTAATATCC CTAGTGAAGC TTCGTTTGCT ATTTCTAATA TTGAAAGCCC TTCGTTTTTA
ATAAACTTTG TGTCGTCTAA CATGAATCTT TCTGTTGCAG ACAAGCAAAA ATTGCTAGCT
ACAAATGATT TAAAAGAGCG TGCTTTAGCT ACATTGAAGT TTATGAACGT TGAGCAGCAA
AAGCTCGAGC TTAAAAATGA CATACAGAGT AAGGTGCAGA GTGATATGAG CCAACAACAG
CGCGAGTATT TCCTACACCA ACAAATGAAA ACTATTCAGG AAGAGTTAGG TGGCGTTTCT
CATGAGGATG AAGTAGAGGA GATGAAACAA CGTGCCAAGA AAAAATCTTG GGGAGAAGAT
GTAGCTAAAC ACTTTAAAAA AGAGATTTCT AAATTACAAC GTATGAATCC TCAGGTTTCT
GAGTATTCTA TACAACGTAA TTATTTAGAT TTATTCTTGG ACTTACCTTG GAATGAGTTT
AGCAAAGACA AATTCGACTT AAAGCGTGCA ATGAAAATTC TAGACCGTGA TCACTACGGT
TTAGAAGATG TTAAAAAACG AATTATTGAA TATCTAGCGG TTTTAAAACT GCGTAACGAT
ATGAAATCGC CAATCTTATG TTTATATGGT CCTCCAGGCG TTGGTAAAAC ATCTTTAGGA
AAGAGTGTAG CCGAAGCTTT AGGAAGAGAA TATGTAAGAA TTTCATTAGG TGGTTTAAGA
GATGAAGCTG AAATAAGAGG CCACAGAAAA ACCTACATTG GTGCAATGCC AGGTAGGATT
ATACAGAGTC TTAAAAAGGC AGGAACTAGT AACCCTGTAT TTGTCTTAGA TGAAATAGAT
AAAATAGGAA CAGGAAACCA AGGCGATCCT TCTTCTGCGT TGCTAGAGGT TTTAGATCCA
GAACAAAATA ATGAATTTCA TGACAACTTC TTAGAAATGG GGTTTGACCT TTCTAAGGTT
ATGTTTATAG CAACGTGTAA CAGTTTAAAT ACTATACAAC CAGCTTTACG TGACCGTATG
GAAATTATAA ATGTTACGGG TTATACTATT GAAGAAAAGG TTGAAATAGG TAAAAAGCAT
TTATTACCTA AGCAGTTAGA AGAACACGGT CTTACCAAAG ATCACCTTAA GATAGCAAAG
CCACAACTTG AAAAAATAGT TGAAGGTTAT ACTCGCGAAA GTGGTGTAAG AAGTCTTGAA
AAGCAAATTG CCAAAATGGT AAGATACGCT GCCAAGAATA TCGCTATGGA AGAAGACTAT
AGTGTAAAAA TCACAAATGA TGATGTAGTT GAAGTCTTAG GTTCTCCTAA ATTAGAGCGT
GATAAATATG AGAATAATGA TGTTGCAGGA GTTGTTACAG GTTTAGCGTG GACTAGAGTA
GGTGGCGATA TTCTCTTTAT AGAGTCTATA CTTTCTAAAG GTAAAGGTAA CTTAAACATT
ACTGGTAACC TTGGTAAAGT TATGAAAGAG AGTGCAACCA TAGCTATGGA GTACATTAAA
GCACACGCTG AAGAATTTGG CATTATACCA ACTATTTTCG AAAAATATAA CGTTCATATT
CACGTGCCAG AAGGAGCAAC ACCTAAAGAT GGCCCAAGTG CTGGTATAAC AATGTTAACG
TCTTTAGTCT CTCTGTTTAC GCAACGCAAA GTTAAAAAGA GCGTGGCTAT GACTGGTGAA
ATAACTCTTA GAGGAAAAGT ATTGCCAGTT GGCGGAATTA AAGAAAAGAT CTTAGCTGCA
AAACGCGCAA GGATCAAGGA AATTGTTTTA TGTGAAGACA ATCGTAGAGA TATAAAAGAA
ATAAAAGAAG AGTACTTAAA AGGATTGACG TTTCATTATG TGACAGACAT GTCTCAAGTA
TTAGACGTTG CTCTTACTAA GCAAAAGGTT AAAAATGCTA AGAAATTATA G
|
|---|
| Protein sequence | MSRTKFTDID SLSLQDLEQD AELIPLMTPE DEEEINKEKL PETLPILPLR NTVLFPGVVI
PITAGRDKSI KLIQDANNGS KVVGVVSQKS EEVENPTGKD INTLGVVARI LRVLKMPDGN
TTVIIQGKKR FEIDEVITED PYLQATIKEV PEARPEKENE EFSAIVDSIK ELALKIIKQS
PNIPSEASFA ISNIESPSFL INFVSSNMNL SVADKQKLLA TNDLKERALA TLKFMNVEQQ
KLELKNDIQS KVQSDMSQQQ REYFLHQQMK TIQEELGGVS HEDEVEEMKQ RAKKKSWGED
VAKHFKKEIS KLQRMNPQVS EYSIQRNYLD LFLDLPWNEF SKDKFDLKRA MKILDRDHYG
LEDVKKRIIE YLAVLKLRND MKSPILCLYG PPGVGKTSLG KSVAEALGRE YVRISLGGLR
DEAEIRGHRK TYIGAMPGRI IQSLKKAGTS NPVFVLDEID KIGTGNQGDP SSALLEVLDP
EQNNEFHDNF LEMGFDLSKV MFIATCNSLN TIQPALRDRM EIINVTGYTI EEKVEIGKKH
LLPKQLEEHG LTKDHLKIAK PQLEKIVEGY TRESGVRSLE KQIAKMVRYA AKNIAMEEDY
SVKITNDDVV EVLGSPKLER DKYENNDVAG VVTGLAWTRV GGDILFIESI LSKGKGNLNI
TGNLGKVMKE SATIAMEYIK AHAEEFGIIP TIFEKYNVHI HVPEGATPKD GPSAGITMLT
SLVSLFTQRK VKKSVAMTGE ITLRGKVLPV GGIKEKILAA KRARIKEIVL CEDNRRDIKE
IKEEYLKGLT FHYVTDMSQV LDVALTKQKV KNAKKL
|
|---|
| |