Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_08531 |
Symbol | |
ID | 9297190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | - |
Start bp | 1868477 |
End bp | 1869697 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003716453 |
Protein GI | 298208274 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATC AAGACCTTTT AAACATTACT GAGGCATACG GTAGTCCCGT ATATGTGTAC AATGCTGAGA CAATTGAATC TCAGTACAAA CGCTTAACCA GTGCATTTAA AAAGGTCAAA CAGGTGCGTA TTAACTACGC AGTTAAGGCA TTATCTAATT TAGCAATACT TCAACTAATG AAGCGTATGG GCGCAGGTCT AGACACCGTT TCTATTCAAG AAGTAAAATT AGGCTTAGCT GCTGGCGTAG ATCCTAAGAA AATTATATAC ACTCCAAATG GAGTGTCTAT GGAGGAAATA GAAGAAGTTG CAGCACTTGG TGTTCAAATA AACATAGATA ATCTTTCTGT TTTAGAGCAG TTTGGAACTA AACATCCTAA AATTCCTGTT TGTATTCGTA TAAACCCTCA CGTAATGGCA GGTGGTAACA CTAACATTTC CGTAGGACAT ATAGATAGTA AATTTGGAAT AAGCATTCAC CAAATTCCGC ATATACTAAG AATTGTAGAG CTTACTAGAA TGAATATAAA TGGTGTGCAT ATGCATACGG GTAGCGATAT TTTAGATATT GATGTTTTCT TATATGCTTC TGAAATTTTA TTCGACACGG CTAAAAACTT TAAAGATTTA GAGTTTATAG ATTTTGGTAG CGGATTTAAA GTCCCTTATA AAGAAGGCGA TATTGAAACT AATATCGAAG AGTTTGGAGA CAAGCTTTCT ACACGCTTTA AAGAATTTTG CAAAGAATAT GGTAAAGACC TAACCTTAGC GTTTGAGCCA GGTAAATTTC TAGTGAGCGA GGCTGGTAAG TTTTTAGCTA AAGTAAATGT TGTAAAGCAA ACAACATCTA CAGTATTTGC TCAAATAGAT TCTGGTTTTA ATCACTTAAT AAGACCAATG CTTTACGGTT CTCAACATGA GATTATGAAC ATTTCTAACC CTAACGGGAG ACAACGTTTT TATTCTGTTG TAGGCTATAT CTGCGAAACA GATACTTTTG CAAACAACAG ACGTATAAAC GAAATTAAAG AAAATGACAT TTTAGCATTT AGTAATGCAG GAGCCTATTG CTTTAGTATG GCTAGTAATT ACAACTCTAG ATTTAGACCA CCAGAAGTAC TTTGGTACCA AGGTAAGGCA CATTTAATAC GCGAACGTGA AACCTTCGAC GATTTACTGA AACACCAAGT TCCTATGGAA TTTGAACCAG TAACAGCCTA A
|
Protein sequence | MKNQDLLNIT EAYGSPVYVY NAETIESQYK RLTSAFKKVK QVRINYAVKA LSNLAILQLM KRMGAGLDTV SIQEVKLGLA AGVDPKKIIY TPNGVSMEEI EEVAALGVQI NIDNLSVLEQ FGTKHPKIPV CIRINPHVMA GGNTNISVGH IDSKFGISIH QIPHILRIVE LTRMNINGVH MHTGSDILDI DVFLYASEIL FDTAKNFKDL EFIDFGSGFK VPYKEGDIET NIEEFGDKLS TRFKEFCKEY GKDLTLAFEP GKFLVSEAGK FLAKVNVVKQ TTSTVFAQID SGFNHLIRPM LYGSQHEIMN ISNPNGRQRF YSVVGYICET DTFANNRRIN EIKENDILAF SNAGAYCFSM ASNYNSRFRP PEVLWYQGKA HLIRERETFD DLLKHQVPME FEPVTA
|
| |