Gene CA2559_05580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_05580 
Symbol 
ID9296613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1267266 
End bp1270622 
Gene Length3357 bp 
Protein Length1118 aa 
Translation table11 
GC content33% 
IMG OID 
Productputative membrane-anchored cell surface protein 
Protein accessionYP_003715879 
Protein GI298207700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA TACTACTTTT AATTAGTCTT CTTTTTACAT CAATATTTTA TGCACAATGT 
CCTACAGGAA ATTTTGCAGA TTTAAGAACA CAAGCCGATG TCGATGATTT TGGCGCCAAC
TTTCCAAACT GTACCACACT TATTGATTTA AGAATAGGGA CAACTGCAGT ATCTACAGAT
CAAATTACAG ACCTTTCGCC ACTTTCTTCA TTAACTACTG TTCAAGACTT ACTAGTTATA
GAAAATGATG ATCTTTTAAA CTTAAACGGT TTAGGAAATA TAACTGTAGA GAATCTTACT
ATTACTCAAA ATGAATCTTT ACAAAGCATT TCTACTAGTC AAATTGAAGT CACCTCTCAA
CTAAGAATTC TTGATAATCC CTCATTAGTT AGTTTAGAAG GTTTTGAAGG AACAACAATG
TTACAAGTTT TAGAGATTAG TAATAACCCT ATAACTTCTC TTTCAGGATT AGATAATCTC
ACAACTGTAA CATTTTCTGC AGCAATTAAT GACAATGACG CTCTATTAAA CTTATCTGGT
CTTGGAGGCT TAACCTTAGC TCGCGGATTA AGTGTAAACC AAAATAATAA TCTTCAAAAT
TTAAATGGAG TTGGAATGCT TACTGTTGAT AATTTAGGTA TAAGCTCTAA TGTTGCTATG
TCTGAAATTT CTACAACGAC GAGCATAAAT GTTACTGTAA ATTTAGAAGT GAATAATAAT
ACTTCCTTGG ATAATTTTAC TGGCTTAGAA GAGACAACTC ACCTTCAAGA TCTTCGCCTT
TCAAACAACG CCATAACATC ATTTACTGGA TTAAATAATC TTGTGGAGAT AAGTGATTTT
TTCAGAATTA TACAATCTCC AAATATTACA AACTTTACAG GTTTAGATAA TTTAGGAATT
ATAGAAAGTT TAGAAGTTAA TAATAATAGT AGCCTAACTA ACCTTAATGG ATTGCCTGAT
GCTACCTTGT CTTTTGTCCT TATAAGCAAT AATCCTGTAC TACAGCAAAT TGCGACAACA
AATACATTAC AGGTGACAGA AAGCTTGCAG GTTTTGTTAA ACGACGACCT AAATAACTTA
CAAGGACTTG AAACAACAAC AAGCTTAAGT AATGTCTCAA TTAGTAGCAA TACTATTTCT
TCTTTAGTGG GCTTAGAAAA TTTAACTGAG GTAACAGGGT TTTTAACTAT AGCTTCTAAT
ATTATATTAC CTAACCTTAC AGGCCTTACC AATTTACAGA GTGTAATGAC ATTAGTTGTA
GAGTTTAATG AGGATTTGAT TAACTTAGAT GGTTTGGGTA GCACTACTAT TCAAGAGTTA
GCTGTTACAG ATAATCCATC AATGTCTTCA ATAGCATTAA CAAGTGAACT TGAAGGGATG
CAAGAAATTG AAATAGTGGA CAATGCTCTG TTAACAGATC TAACTGGATT AGAGAATATT
GTTTCAACCT CATTTATCGG TCTTAGCGGA AATGGTATAA CATCACTAAA TGGGTTGCAA
AATTTAGAGA GCGTTCAAAA TTCCTTTATT ATAAATACTA ACGATATGTT ACCCAACTTG
AATGGTTTAA CTAGCCTTCA ATATGTTGAG TCACTTACCG TAGGTCTTAA CGAGACAATG
GTTAATTTAA ATGGTGTTGG TGATATACAG GTTGCAGCAT TAAGGCTTAC ACTTAGTCCT
AATGTACAAC AACCATTAAC GCAAGGTTCA ATAGCTGTAA CATCTAGCAT AGCTATTGAA
GATAATCCTA ATATCACAAA CTTAAATGGG TTAGAAACTA CAACTCAAGT TAGTTCTATT
AGTATTGAAA GAAACCCTTT ATTATTTAAT ATTAATAGCT TGGAAAATGC AACTGTAGTA
GGAAATGTGC AAATTATAGA TAATGCCGCG TTGTCTAATT GTAGTATAGA GAGCTTTTGT
CTGGCCATTG CAGCAGGAAA TACAAATTTT AATATTGCCA ATAACGCAAC AGGTTGTAAT
TCATTACAAG AAATTGAACA AGGCTGTATA GGTGTTGTTA ACTCTCTTAC AGGAACTATT
TCTTTCGATA TAGATAACAA TGGCTGTAGT ACAGGAAACA CACCATCAGA AGGCATACTT
GTTAGTGTAG AAAATTCAAA CGGAATACTA TCAACACTTA CAGATAGTAA TGGTAACTAT
GTGTTATTAT TATCTGATAA TGAATATACG GTATATATAA ATGAACAATC TTTACCAAGT
GATGTTTCGT TTTCTCCTGC AAGTCAAACT GTTTTATTCA CAGAATCTGA AACAGAGGTA
ACTGCAGATT TCTGCCTAAC ATCTTCAAGT TCTTATGACG ACCTAGCAGT TTCAATTTTT
CCATTAGAAG AAGCACGACC AGGTTTTGAA ACAGATTATT TAATCAATTT TGAGAATAAC
GGAACTACAG TTTTAAATCC CACTATAACT TTAATGTTTG AAGATACTAA GATGAATTAC
CTTAGTAGTA CACCTCAAGA GACTTCAGTA ACTAGTAATA TGGTAACTTG GAGTTTTAGC
AACTTGCAGC CATTTCAAAG TGGCTCTATT GTGTTTACTA CAGACATTTT TCAGCCACCA
ACAGTTAATG GAGACGATAT CCTAAGCTAT ACAGTAACAA TATCTCCAAA CTCAAATGAT
GCTATTCCAG AAGATAATAG TCAGGTTTTC GAGCAAATAG TAGTAAATTC TTTTGATCCA
AATGACAAGC AAGTAACACA AGGTGAAAGT ATTTTAGAAG CAGAAGTGCC TAATTATTTA
GATTACCTGG TTCGTTTCCA AAATACAGGT ACAGCAAGTG CTGTAAATAT AACAGTAACA
GATACATTAT CTAATAATTT ACAATGGGGA ACTTTAAAAG CAGTAGCTTC TAGTCATGAG
TACAGATTAG AGGTAGAAGA TGGAAACATT GTAAAATTTA TTTTTGAAGA TATATTTCTT
CCTGCAGAAC AAGATGACTC AGAAGGTAGT AACGGGTATG TTGCATTTAG AATAAAGCCA
GTAGCAAGCC TTACAATTGG AGAGTCTGTA GAAAATACTG CAAATATCTT TTTCGATTTT
AATGAGCCAA TCATCACCAA CACTGTAACT ACAGAGGTAG TGGCGCCACT TAGTGTCCCA
GAAACTAGTA TGCCCGAAAA TATATTGATT TATCCTAATC CAGTAAATTC GTATTTAAAT
GTAGAAACTG TTTCAGGTAA TACAGTCACA TCAATAGTAG TAACAACGTT AACGGGGCAA
CGTTTATTAA CATCAAAGAA CACCTCTATT AATTTAACTT CTCTAACTAA AGGTATTTAC
TTTGTGACAG TTACAACCCA GCAAGAAAAA TTTATAAAAC GAATAATAAA AGATTAA
 
Protein sequence
MKQILLLISL LFTSIFYAQC PTGNFADLRT QADVDDFGAN FPNCTTLIDL RIGTTAVSTD 
QITDLSPLSS LTTVQDLLVI ENDDLLNLNG LGNITVENLT ITQNESLQSI STSQIEVTSQ
LRILDNPSLV SLEGFEGTTM LQVLEISNNP ITSLSGLDNL TTVTFSAAIN DNDALLNLSG
LGGLTLARGL SVNQNNNLQN LNGVGMLTVD NLGISSNVAM SEISTTTSIN VTVNLEVNNN
TSLDNFTGLE ETTHLQDLRL SNNAITSFTG LNNLVEISDF FRIIQSPNIT NFTGLDNLGI
IESLEVNNNS SLTNLNGLPD ATLSFVLISN NPVLQQIATT NTLQVTESLQ VLLNDDLNNL
QGLETTTSLS NVSISSNTIS SLVGLENLTE VTGFLTIASN IILPNLTGLT NLQSVMTLVV
EFNEDLINLD GLGSTTIQEL AVTDNPSMSS IALTSELEGM QEIEIVDNAL LTDLTGLENI
VSTSFIGLSG NGITSLNGLQ NLESVQNSFI INTNDMLPNL NGLTSLQYVE SLTVGLNETM
VNLNGVGDIQ VAALRLTLSP NVQQPLTQGS IAVTSSIAIE DNPNITNLNG LETTTQVSSI
SIERNPLLFN INSLENATVV GNVQIIDNAA LSNCSIESFC LAIAAGNTNF NIANNATGCN
SLQEIEQGCI GVVNSLTGTI SFDIDNNGCS TGNTPSEGIL VSVENSNGIL STLTDSNGNY
VLLLSDNEYT VYINEQSLPS DVSFSPASQT VLFTESETEV TADFCLTSSS SYDDLAVSIF
PLEEARPGFE TDYLINFENN GTTVLNPTIT LMFEDTKMNY LSSTPQETSV TSNMVTWSFS
NLQPFQSGSI VFTTDIFQPP TVNGDDILSY TVTISPNSND AIPEDNSQVF EQIVVNSFDP
NDKQVTQGES ILEAEVPNYL DYLVRFQNTG TASAVNITVT DTLSNNLQWG TLKAVASSHE
YRLEVEDGNI VKFIFEDIFL PAEQDDSEGS NGYVAFRIKP VASLTIGESV ENTANIFFDF
NEPIITNTVT TEVVAPLSVP ETSMPENILI YPNPVNSYLN VETVSGNTVT SIVVTTLTGQ
RLLTSKNTSI NLTSLTKGIY FVTVTTQQEK FIKRIIKD