Gene CA2559_00040 details

Gene Information

• Locus tag: CA2559_00040
• ID: 9295484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 37665
• End bp: 38363
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 39%
• Product: 50S ribosomal protein L1
• Protein accession: YP_003714778
• Protein GI: 298206599

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAT TAACAAAGAA ACAAAAAGAG GCTCAATCTA AGATTGAAGC TGGCAATACC 
TACACGGTAG CCGAGGCCTC TGCTTTGGTT AAAGAAGTCG CTAACGCAAA TTTTGATGCA 
TCTGTAGATT TAGCAGTTCG TTTGAACGTA GATCCTCGTA AAGCAAATCA AATGGTGCGT 
GGCGTTGTAA CATTACCTCA TGGTACTGGT AAAGACGTTA AGGTGCTTGC TTTAGTCACT 
CCAGATAAGG AAGCAGAAGC AAAAGAAGCT GGTGCAGATT TTGTTGGTTT AGATGAGTAT 
CTAGATAAAA TTAAAGGCGG TTGGACAGAC GTTGATGTAA TTATTACTAT GCCAAGTGTT 
ATGGGTAAGT TAGGACCATT AGGTCGTGTA TTAGGACCAA GAGGTCTTAT GCCTAACCCA 
AAAACTGGTA CAGTAACAAT GGATGTTGCT AAAGCAGTAT CAGACGTTAA AGCTGGTAAA 
ATCGACTTTA AAGTTGACAA ATATGGTATT GTTCACGCTG GTATCGGTAA AGCATCTTTT 
GATGCAGACA AGCTAGCTGG CAATGCAAGA GAATTATTAA CCACATTAGT GAAATTGAAA 
CCTACTGCAG CAAAAGGTGT TTACATAAAG TCTATCTATA TGTCTAGCAC AATGAGCCCA 
AGTGTTCAAA TTGATACTAA AAGATTTACT GAGGACTAA 

 

Protein sequence

MARLTKKQKE AQSKIEAGNT YTVAEASALV KEVANANFDA SVDLAVRLNV DPRKANQMVR 
GVVTLPHGTG KDVKVLALVT PDKEAEAKEA GADFVGLDEY LDKIKGGWTD VDVIITMPSV 
MGKLGPLGRV LGPRGLMPNP KTGTVTMDVA KAVSDVKAGK IDFKVDKYGI VHAGIGKASF 
DADKLAGNAR ELLTTLVKLK PTAAKGVYIK SIYMSSTMSP SVQIDTKRFT ED