Gene Bxe_C1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1389 
Symbol 
ID4010900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1466065 
End bp1467144 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content59% 
IMG OID637953967 
Productputative oxygenase 
Protein accessionYP_556587 
Protein GI91781380 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC TGAGCGATAC AGATAAGCCA ACGGCATCCG CCCAGCGTGA CATGCCTCAG 
GAATTTCTTC CGCCGCGATG TACGTTCAGT GCGGAAGACT GGCGCATCCT GGCCAGACAG
TGGTACCCGG TTGCCCGCAG TGTCGATGTG AAATCCTCGC CGGTAGCTGT GACGCTTCTC
GATCTCGAAC TGGTGACTTA CCGGACACCT GCCGGTGTCC ATGTGGCGAG GGACCTGTGT
CCGCACCGGG GCGTACCGTT GAGCATGGGG TGCGTCGAGG GTGATGAACT GGTCTGCGCT
TATCATGGCC TACGATACGC AGCAGACGGT CAATGCCGTA AGATTCCCGC TCAACCTGAG
TTGAAGCCTT CCGCAAAATT CCGGCTGACC GTGTTTCCGG CCGTAGAGCG CTATGGTCTC
GTCTGGACCT GCCTGAATCC TCAGGGTGGC GAAGCGAACC TGCCGCCAAT GCCTTCATGG
GGCGATCCGC TCTGTCAGTC GATCCTGCCG CCTTTCGTCG ACATCGCGGG ATCGGCTGGC
CGCCAGGTCG AGGGATTTGT CGACGTCGCG CATTTCGCAT TCGTCCATCA CGACGCATTT
GCGGACCGTA ACCGGCCCGA GGTTCCGATG TACCAAACGG AATTCACCGA CTTCGGATTG
CGCACCGAAT ACTGGAGCAA TGTCAGCAAT TACCCCAAGG CACTGCAGCA TCTTGCCCCC
GACGACTTCT CTTGGCTGCG CGTCTATGAG ATTTACCCGC CGTTTTGCGC CCGCTTGACC
GTGCATTTCC CTAACGAAGG GCGGCTGAAC ATTCTGAATG CAGCAAGCCC AGTCTCAGCA
CGCAAAACCA GGCTGTTCGT TCCCATTACG CGAAATTTCG ATACCACCGG ATCGCTCGAC
GACGTCTATG CCTTTAACGC GCAGATCTTT GCGGAAGACC AGGCGATTGT CGAACGGCAG
AGGCCGGAAG ATCTGCCGCT CGACATGCAG GCCGAAGCGC ATTTCGCGGC GGACCGGACT
TCGGTCGGCT ACCGCCGCCT GCTCAGGGAG ATGGGCTTGA CCATGGCGTA TGCCGGTTGA
 
Protein sequence
MQVLSDTDKP TASAQRDMPQ EFLPPRCTFS AEDWRILARQ WYPVARSVDV KSSPVAVTLL 
DLELVTYRTP AGVHVARDLC PHRGVPLSMG CVEGDELVCA YHGLRYAADG QCRKIPAQPE
LKPSAKFRLT VFPAVERYGL VWTCLNPQGG EANLPPMPSW GDPLCQSILP PFVDIAGSAG
RQVEGFVDVA HFAFVHHDAF ADRNRPEVPM YQTEFTDFGL RTEYWSNVSN YPKALQHLAP
DDFSWLRVYE IYPPFCARLT VHFPNEGRLN ILNAASPVSA RKTRLFVPIT RNFDTTGSLD
DVYAFNAQIF AEDQAIVERQ RPEDLPLDMQ AEAHFAADRT SVGYRRLLRE MGLTMAYAG