| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1366 |
|---|
| Symbol | |
|---|
| ID | 4010877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 1439954 |
|---|
| End bp | 1441288 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637953944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_556564 |
|---|
| Protein GI | 91781357 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGAA ACACACAGCC CAACCGCCTG AACCTGTGGA TGAACGGCTT GCAGGTCGGT
TATTGGGAAA CGACCCGCAA CGGTGAACGT CTGGCGTATC GGGACGACTG GATCGACGAT
CCGCAGGGGC GCCCGCTGTC ATTGTCGCTT CCTTTTACGC CAGGCAACCA GCCCTATCGC
GGCGAGGTCG TCGCGAACTA TTTCGACAAT CTGCTCCCCG ACAGCGAACC GATCCGTCGC
CGGATCGCCA CGCGCTACCG AACCGGTAGT ACCGCGCCTT TCGCGTTACT CGCCGCGCTC
GGCCGCGACT GCGTCGGCGC CCTTCAGTTG CTGCCACCGG ACGAGGCGCC CACCGACCTC
ACGACCATCA GCGGGCGCAA GCTCGACGAC GGCGAAATTG CCCGCCTGCT GCGAGGCACG
ACGTCGACAT CACCGCTCGG ACAACACGAT CCACTGGAGG ATCTGCGCCT GTCGATCGCG
GGCGCGCAGG AAAAAACCGC CCTGCTCCGG CATCACGACC GCTGGCTGCT GCCTGAAGGC
AGTACGCCGA CCACGCATAT CTTCAAGTTG CCGCTGGGGC TGGTCGGCAA TATGCGGGCG
GACATGCGTA CCTCCGTGGA AAACGAGTGG CTCTGCTCGC AAATCGTCGC GGCCTACGGG
CTGCCCGTCG CCCGTTGCGA GATCGCCGGC TTCGAAGACC AGAAGGTGTT GATCGTCGAG
CGATTCGACC GCCGGCTATC CAGCGACGCC ACATGGATCG TGCGGCTCCC CCAGGAGGAC
ATGTGCCAGG CGACGGCCAC CTCGGCGCTT CACAAGTACG AGTCCGATGG CGGCCCGGGG
ATCGAGGCGA TCATGGAGGT GCTCTCCGGT TCCGCGCGCG CGGCGCTCGA CCGGCGCAAC
TTCTTCATGA CGCAGTTGAT CTTCTGGCTG CTCGCCGCAA CCGACGGCCA CGCAAAGAAC
TTCAGCATCG CGCATTTGCC GGGCAACCGC TACGAATCCA CGCCGCTCTA CGATGTGCTT
TCCGCGCATC CGATCATCGG TGCCGGCGCC GGTCGCTTGC CTGCGCAGAA GGTCAAGCTG
GCGATGGCGG TGCGTGGCAG GAACGTCCAC TACCTGCTCA ATCAGATCCA GCGTCGGCAC
TGGATTACCG AAGGGCAGCG CGTCGGGTTT TCCGCGGAAA ATGTGGAGGC GATGATCAGC
GAGATCACTG CACGGACCGA GGCCGTGATC GACGAGGTGT CGTTGCGATT GCCCGCGGAC
TTCCCGATTG ACGTGGCCGA GGCGATCTTC GACGGGATGC GTCGCCTGAA CAGGAAGCTG
GCGCCGGCGC GGTAA
|
|---|
| Protein sequence | MVRNTQPNRL NLWMNGLQVG YWETTRNGER LAYRDDWIDD PQGRPLSLSL PFTPGNQPYR
GEVVANYFDN LLPDSEPIRR RIATRYRTGS TAPFALLAAL GRDCVGALQL LPPDEAPTDL
TTISGRKLDD GEIARLLRGT TSTSPLGQHD PLEDLRLSIA GAQEKTALLR HHDRWLLPEG
STPTTHIFKL PLGLVGNMRA DMRTSVENEW LCSQIVAAYG LPVARCEIAG FEDQKVLIVE
RFDRRLSSDA TWIVRLPQED MCQATATSAL HKYESDGGPG IEAIMEVLSG SARAALDRRN
FFMTQLIFWL LAATDGHAKN FSIAHLPGNR YESTPLYDVL SAHPIIGAGA GRLPAQKVKL
AMAVRGRNVH YLLNQIQRRH WITEGQRVGF SAENVEAMIS EITARTEAVI DEVSLRLPAD
FPIDVAEAIF DGMRRLNRKL APAR
|
|---|
| |