Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1317 |
Symbol | |
ID | 4010829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1388542 |
End bp | 1389441 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637953904 |
Product | polar amino acid ABC transporter inner membrane protein |
Protein accession | YP_556524 |
Protein GI | 91781317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACAT CGTCAACCTC CCATTCACTA CCCGCCATGC AGTCGGAGGC GGAGCAGCCC GGTTCGGAAG AGCCGGCCGT GGTCAAAGAC CGGCCATCGC CCGTTCGTCT GGGCGCATGT GCGTGCGTGG CGCTACTGAT GATCGGGCTT GGCTGGTCGT TCGTAGCCAA TCCGCGAATT CACTGGACTG TCGTCGGAGA CTATCTATTC AGCAGGGATA TCCTGGAGGG TGTGCTGATG ACGATAGTCC TGACGGTGTA TGCGATGGCG ACCGGTGTTT TCATCGGCAT CGCGCTGGCG CTGATGCGGC TGTCCGATGA CTGGTTCCTG AGCGGCTTCG CCCGCTCGTA TGTCACGGTC ATGCGAGGCA TTCCGGCGCT CGTGCAGCTT ATCTTCTGGT ACAACCTGTC GGCCATTTTT CCACACATCG GGTTCTCCCT GCCTGGGCTC GGATCCATGT TCGTGGATGC CAATAAGGCG ATTACTCCCA TGACGGCGGC CGTTCTTGGT CTGGGTCTGT GCGAGGGGGC GTACATGGCT GAAATCGTAC GCAGCGGCAT CCTTGGGATC GATGCCGGTC AGCGGGAGGC GGCGCTCGCG GTAGGTCTGA GCCGGGCTCA AGCAATGCTT AAGGTGATCC TGCCTCAGGC ACTTCGCATC ATCGTTCCAC CGACCGGCAA CCAGGTGATT GGCATGATGA AGCTGACGTC GCTGGCCAGC GTGATCTCCT TCACCGAACT GTTGACGTCT GCCCAACTCA TCTTCAATCG CACGTTCGAG GTAATTCCTC TGCTGATCGT CGCATCGCTG TGGTACCTGG CTCTGTCACT CGTGCTGAGT ATCGGACAGC GATATCTGGA ACAGCGATTC GGCCGCTACA AGAGAAGAAC CATGCAGTGA
|
Protein sequence | MNTSSTSHSL PAMQSEAEQP GSEEPAVVKD RPSPVRLGAC ACVALLMIGL GWSFVANPRI HWTVVGDYLF SRDILEGVLM TIVLTVYAMA TGVFIGIALA LMRLSDDWFL SGFARSYVTV MRGIPALVQL IFWYNLSAIF PHIGFSLPGL GSMFVDANKA ITPMTAAVLG LGLCEGAYMA EIVRSGILGI DAGQREAALA VGLSRAQAML KVILPQALRI IVPPTGNQVI GMMKLTSLAS VISFTELLTS AQLIFNRTFE VIPLLIVASL WYLALSLVLS IGQRYLEQRF GRYKRRTMQ
|
| |