Gene Bxe_C1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1276 
Symbol 
ID4010788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1336441 
End bp1339590 
Gene Length3150 bp 
Protein Length1049 aa 
Translation table11 
GC content67% 
IMG OID637953866 
ProductOuter membrane autotransporter barrel protein 
Protein accessionYP_556486 
Protein GI91781279 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3468] Type V secretory pathway, adhesin AidA 
TIGRFAM ID[TIGR01414] outer membrane autotransporter barrel domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0821611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCATA AGGGGCGGCT GTCGACAAAA CTGAAGCCAC ACTACGTCGT TGAGGGCAGC 
CTCATGATGC CGGGCAAAAC TGCGTCGAAG GTCGACGGTT ATCTCTTCCA GCAAGGCGTC
GTATGCGCAT TGCGTACGTT GGCGGGTGCC TGGTTCGTGA TGGCTGTCAG CGTTTCCCCC
GCTCAAGCCG CCTGTGCGCC CGATGGCCAG GGCGGCATCA CCAATAGCGG CGGCACCTGT
TCGGTCGCCC CGCCCGTCAA CCGCATCACT GCAACCGGCA GTGGCACCAC CACCGCACCC
GGTGTCACGC TCGCCGTGCC GTATGGCATC GCCGTGACAG CATCGGGAGG GGCGTCGGTC
AGCCTTGGCC GAAGCGACGC CGGCGGCGCG CCGGCGATTT CAGCTCTGAA CGGCGGCGGC
CTCACGGGCC TGTTTGCGAC CGGGGTGTCC AGTACGATCA CGGCGGACAG TCTCGCCATC
GGGCTTCCTT CGGGGGGCGG CAACGCGGCG GCGAGAGCAA CCGCCGGCGG CCACATCACG
TTCCTGAATA GCGCAAACAT CACCTTCGTA CCTGGCGGCG GTGGCGGCAC GGGCCTGCTG
GCCGATGGCG CAGGCAGCCA GATTACCGGC ACCAACGTCA CCGTGGCAGG CGCGGGCGGC
GGCGGGGATT ATGTCGCACA CAGCAACAAC GGCGGGGATA TCGCCTTGAC CGGCGGCGCA
CTCAGCCTGA ATTCCCCCGG CGGTGGCGGA GTGGCGGTGC TGTCGGAAAA CGGCAGCACC
TTCACCGGCG ACGGCGTCGC CATCAGCGTG TCCGCTTCAG GGGGAGATGC CGCGGTGAAG
TCGGTCGGCA ACAGTCATGT TTCCCTGAGC GGCGGCTCCG TCACGCTGAA CGGAACAAGC
GGTGAGACCG GCTTGCTGGC ACAAGGCGCG ACGCTTACCG CCGTCGGCGT GCCTGTCAGC
GTGACGGCCA GCCAGTCGTC CGCCGGCACC GTGCAGGGCG GCGGCACGCT CGCGATTACC
GGCGGTTCGG TGACGGCGTC GGGCAGCGGC ACGGTCGGGA TGCTCGTCAA CGGAGCGGCG
GGCGCGGCCA ATACGCTCGC GCTCAACGAT ACGACCGTCA CATCGACAGC CGACTCGCTG
CATGTCGTGG GCGCGAATGC GAACATCACG GCGGCGGGAT CCACCATCAC CGACAACAAC
GGTGTGCTGC TCAGCACAAC CGGATCTCCA TCGACGACCA CATTCGACGC GGGCGCGTCG
ACACTTGGCG GAGCGATCAC GACCGGTGCC GGCACCACGA CGACCGTCAC GCTGCACGAC
GATACCGACT GGACCGTCAC GGGCAATTCC ACGGCGACCA ACCTGACCAA CAGCGCGAGC
AATATCCACT TCACGGCGCC GGCCGACCCG AGCCAGGCCG CCAGCTACAA GACGCTCCAG
GTGCAGAACT ACACTGGCGC AGACGGCAAC CTCCATCTCA ACACGTTTCT CGGCAGCGAC
GACGCCCCGT CGGACAAACT GATCGTGAGC GGCGGCACCG CGACCGGCAC GACAAATCTC
ACGATCCACA ACACGACCGG CCCAGGCGAC ATGACGGTGG CCGACGGCAT CCAGGTCGTG
CAAACCCTCA ACGGCGGAAC GACGGCATCC GATGCCTTCA CGCTGACCGG CAGATTACGC
GCCGGAGCGT TCGACTACCT GCTGTTCCAT GGCGGCATCG GCGGCAGCCG TCCCAATGAC
TGGTTTCTCC GCTCGAGCTT CGTCGTCCCC GAGTCGATCA CACCGACGGT GCCATTGTCG
CCGGCGACAC CTTCGTCGCC ACCTGGAGAG CCGGGTACAC CTTCGTCGCC GCCCGGAGAG
CCGGGAACGC CTTCGTCGCC GCCCGGACAA CCGGGTACAC CTTCGTCGCC ACCAGGACAA
CCGGGTACAC CTTCGTCGCC ACCAGGACAG CCAGGTACAC CTTCGTCGCC ACCAGGACAG
CCGGGTACAC CTTCGTCGCC ACCAGGACAG CCAGGTGCAC CTTCGTCGCC ACCAGGACAG
CCGGAAACCC CTTCGTCGCC CGGACAGCCC GGCGGCCAGA CGACGCTGGA CGTATCCCGG
CCTTTTCCGG CCGACCCGCC AGCCAGCCCG CTACAGCCGG GCGTGACCTA TCCGGTCATC
GGGCCTGAAC TCGCCACCTA TGGCGTGGTC CAGCCGGTTG CCCGGCAGAT GGGCTTCACG
ATGCTCGGCA CGCTGCACGA GCGCATCGGC GACACGTTGA CGGCCGACAA CGCCGGCCCT
GACAGCGAAG GCTGGGGACA TTCCGGCTGG GCACGCTTCT TCGGCCAGCA GATCGACAAC
CGCTACCAGG CGTTCGCCAG TCCCCGTGCC ACCGGCCAAC TGCTCGGCGT GCAGGCCGGG
GTGGACGTCT GGCGCGGCAG CCTGATGCCC GGCCACCGCG ATGTCGCCGG CGTCTACTTC
GCCTACGGCA ACAGCAACCT GGATGTGGAC GGACTCGTCA CGAACGCCAC GGCCACTGCC
TATCTCCTGG GCCGCACCGG CAAGCTGAAT CTCGACGCCT ATTCCGGCGG CGCCTACTGG
ACCCATTACG GCCCCGGCGG CTGGTATCTG GACCTGGTGC TGCAAGGCAC GTCCTACCAG
GGCGAGGCGA CGACGCAGTC GGCCAGGCTG CCGACCACGG GCGACGGTTT CGTCACCTCG
CTGGAGGCCG GCTATCCGGT GCCGCTGCCA CTCGGCCCCC GCTTCGTGCT GGAGCCGCAG
ATCCAGGTGC TGTGGCAGCG GGTCAGCTTC GACCAGGAAA ACGATGGTCT GGGCCCGGTC
GACCTCGGCT CAACCACCGG CACCACCGGA CGGCTCGGCT TGCGGGGCCA GTGGACCATC
GACGGTGACC ACGGCCAGGT GTGGCAACCG TATGGCCGCG TCAATCTGTG GCACGACTGG
GGCGGGCGCG CGACAACCCT GTTTGGCGTC GATCAGGTGC CGCTGCGGGA CGCAGCAACG
CGGCTGGAGT TCGCAGCCGG CGTTACCGCG AAGGCAACTC TTCGTCTGAG TCTCTATGCT
CAGGCCGGGT ATCAGTTCGC TGTGGGAGCC GGTGAAAATA GCCGGCGGCA GGGGGTGCAG
GGCAATCTCG GGCTCCGGTA CACCTGGTGA
 
Protein sequence
MLHKGRLSTK LKPHYVVEGS LMMPGKTASK VDGYLFQQGV VCALRTLAGA WFVMAVSVSP 
AQAACAPDGQ GGITNSGGTC SVAPPVNRIT ATGSGTTTAP GVTLAVPYGI AVTASGGASV
SLGRSDAGGA PAISALNGGG LTGLFATGVS STITADSLAI GLPSGGGNAA ARATAGGHIT
FLNSANITFV PGGGGGTGLL ADGAGSQITG TNVTVAGAGG GGDYVAHSNN GGDIALTGGA
LSLNSPGGGG VAVLSENGST FTGDGVAISV SASGGDAAVK SVGNSHVSLS GGSVTLNGTS
GETGLLAQGA TLTAVGVPVS VTASQSSAGT VQGGGTLAIT GGSVTASGSG TVGMLVNGAA
GAANTLALND TTVTSTADSL HVVGANANIT AAGSTITDNN GVLLSTTGSP STTTFDAGAS
TLGGAITTGA GTTTTVTLHD DTDWTVTGNS TATNLTNSAS NIHFTAPADP SQAASYKTLQ
VQNYTGADGN LHLNTFLGSD DAPSDKLIVS GGTATGTTNL TIHNTTGPGD MTVADGIQVV
QTLNGGTTAS DAFTLTGRLR AGAFDYLLFH GGIGGSRPND WFLRSSFVVP ESITPTVPLS
PATPSSPPGE PGTPSSPPGE PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ
PGTPSSPPGQ PGAPSSPPGQ PETPSSPGQP GGQTTLDVSR PFPADPPASP LQPGVTYPVI
GPELATYGVV QPVARQMGFT MLGTLHERIG DTLTADNAGP DSEGWGHSGW ARFFGQQIDN
RYQAFASPRA TGQLLGVQAG VDVWRGSLMP GHRDVAGVYF AYGNSNLDVD GLVTNATATA
YLLGRTGKLN LDAYSGGAYW THYGPGGWYL DLVLQGTSYQ GEATTQSARL PTTGDGFVTS
LEAGYPVPLP LGPRFVLEPQ IQVLWQRVSF DQENDGLGPV DLGSTTGTTG RLGLRGQWTI
DGDHGQVWQP YGRVNLWHDW GGRATTLFGV DQVPLRDAAT RLEFAAGVTA KATLRLSLYA
QAGYQFAVGA GENSRRQGVQ GNLGLRYTW