Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1276 |
Symbol | |
ID | 4010788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 1336441 |
End bp | 1339590 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637953866 |
Product | Outer membrane autotransporter barrel protein |
Protein accession | YP_556486 |
Protein GI | 91781279 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0821611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCATA AGGGGCGGCT GTCGACAAAA CTGAAGCCAC ACTACGTCGT TGAGGGCAGC CTCATGATGC CGGGCAAAAC TGCGTCGAAG GTCGACGGTT ATCTCTTCCA GCAAGGCGTC GTATGCGCAT TGCGTACGTT GGCGGGTGCC TGGTTCGTGA TGGCTGTCAG CGTTTCCCCC GCTCAAGCCG CCTGTGCGCC CGATGGCCAG GGCGGCATCA CCAATAGCGG CGGCACCTGT TCGGTCGCCC CGCCCGTCAA CCGCATCACT GCAACCGGCA GTGGCACCAC CACCGCACCC GGTGTCACGC TCGCCGTGCC GTATGGCATC GCCGTGACAG CATCGGGAGG GGCGTCGGTC AGCCTTGGCC GAAGCGACGC CGGCGGCGCG CCGGCGATTT CAGCTCTGAA CGGCGGCGGC CTCACGGGCC TGTTTGCGAC CGGGGTGTCC AGTACGATCA CGGCGGACAG TCTCGCCATC GGGCTTCCTT CGGGGGGCGG CAACGCGGCG GCGAGAGCAA CCGCCGGCGG CCACATCACG TTCCTGAATA GCGCAAACAT CACCTTCGTA CCTGGCGGCG GTGGCGGCAC GGGCCTGCTG GCCGATGGCG CAGGCAGCCA GATTACCGGC ACCAACGTCA CCGTGGCAGG CGCGGGCGGC GGCGGGGATT ATGTCGCACA CAGCAACAAC GGCGGGGATA TCGCCTTGAC CGGCGGCGCA CTCAGCCTGA ATTCCCCCGG CGGTGGCGGA GTGGCGGTGC TGTCGGAAAA CGGCAGCACC TTCACCGGCG ACGGCGTCGC CATCAGCGTG TCCGCTTCAG GGGGAGATGC CGCGGTGAAG TCGGTCGGCA ACAGTCATGT TTCCCTGAGC GGCGGCTCCG TCACGCTGAA CGGAACAAGC GGTGAGACCG GCTTGCTGGC ACAAGGCGCG ACGCTTACCG CCGTCGGCGT GCCTGTCAGC GTGACGGCCA GCCAGTCGTC CGCCGGCACC GTGCAGGGCG GCGGCACGCT CGCGATTACC GGCGGTTCGG TGACGGCGTC GGGCAGCGGC ACGGTCGGGA TGCTCGTCAA CGGAGCGGCG GGCGCGGCCA ATACGCTCGC GCTCAACGAT ACGACCGTCA CATCGACAGC CGACTCGCTG CATGTCGTGG GCGCGAATGC GAACATCACG GCGGCGGGAT CCACCATCAC CGACAACAAC GGTGTGCTGC TCAGCACAAC CGGATCTCCA TCGACGACCA CATTCGACGC GGGCGCGTCG ACACTTGGCG GAGCGATCAC GACCGGTGCC GGCACCACGA CGACCGTCAC GCTGCACGAC GATACCGACT GGACCGTCAC GGGCAATTCC ACGGCGACCA ACCTGACCAA CAGCGCGAGC AATATCCACT TCACGGCGCC GGCCGACCCG AGCCAGGCCG CCAGCTACAA GACGCTCCAG GTGCAGAACT ACACTGGCGC AGACGGCAAC CTCCATCTCA ACACGTTTCT CGGCAGCGAC GACGCCCCGT CGGACAAACT GATCGTGAGC GGCGGCACCG CGACCGGCAC GACAAATCTC ACGATCCACA ACACGACCGG CCCAGGCGAC ATGACGGTGG CCGACGGCAT CCAGGTCGTG CAAACCCTCA ACGGCGGAAC GACGGCATCC GATGCCTTCA CGCTGACCGG CAGATTACGC GCCGGAGCGT TCGACTACCT GCTGTTCCAT GGCGGCATCG GCGGCAGCCG TCCCAATGAC TGGTTTCTCC GCTCGAGCTT CGTCGTCCCC GAGTCGATCA CACCGACGGT GCCATTGTCG CCGGCGACAC CTTCGTCGCC ACCTGGAGAG CCGGGTACAC CTTCGTCGCC GCCCGGAGAG CCGGGAACGC CTTCGTCGCC GCCCGGACAA CCGGGTACAC CTTCGTCGCC ACCAGGACAA CCGGGTACAC CTTCGTCGCC ACCAGGACAG CCAGGTACAC CTTCGTCGCC ACCAGGACAG CCGGGTACAC CTTCGTCGCC ACCAGGACAG CCAGGTGCAC CTTCGTCGCC ACCAGGACAG CCGGAAACCC CTTCGTCGCC CGGACAGCCC GGCGGCCAGA CGACGCTGGA CGTATCCCGG CCTTTTCCGG CCGACCCGCC AGCCAGCCCG CTACAGCCGG GCGTGACCTA TCCGGTCATC GGGCCTGAAC TCGCCACCTA TGGCGTGGTC CAGCCGGTTG CCCGGCAGAT GGGCTTCACG ATGCTCGGCA CGCTGCACGA GCGCATCGGC GACACGTTGA CGGCCGACAA CGCCGGCCCT GACAGCGAAG GCTGGGGACA TTCCGGCTGG GCACGCTTCT TCGGCCAGCA GATCGACAAC CGCTACCAGG CGTTCGCCAG TCCCCGTGCC ACCGGCCAAC TGCTCGGCGT GCAGGCCGGG GTGGACGTCT GGCGCGGCAG CCTGATGCCC GGCCACCGCG ATGTCGCCGG CGTCTACTTC GCCTACGGCA ACAGCAACCT GGATGTGGAC GGACTCGTCA CGAACGCCAC GGCCACTGCC TATCTCCTGG GCCGCACCGG CAAGCTGAAT CTCGACGCCT ATTCCGGCGG CGCCTACTGG ACCCATTACG GCCCCGGCGG CTGGTATCTG GACCTGGTGC TGCAAGGCAC GTCCTACCAG GGCGAGGCGA CGACGCAGTC GGCCAGGCTG CCGACCACGG GCGACGGTTT CGTCACCTCG CTGGAGGCCG GCTATCCGGT GCCGCTGCCA CTCGGCCCCC GCTTCGTGCT GGAGCCGCAG ATCCAGGTGC TGTGGCAGCG GGTCAGCTTC GACCAGGAAA ACGATGGTCT GGGCCCGGTC GACCTCGGCT CAACCACCGG CACCACCGGA CGGCTCGGCT TGCGGGGCCA GTGGACCATC GACGGTGACC ACGGCCAGGT GTGGCAACCG TATGGCCGCG TCAATCTGTG GCACGACTGG GGCGGGCGCG CGACAACCCT GTTTGGCGTC GATCAGGTGC CGCTGCGGGA CGCAGCAACG CGGCTGGAGT TCGCAGCCGG CGTTACCGCG AAGGCAACTC TTCGTCTGAG TCTCTATGCT CAGGCCGGGT ATCAGTTCGC TGTGGGAGCC GGTGAAAATA GCCGGCGGCA GGGGGTGCAG GGCAATCTCG GGCTCCGGTA CACCTGGTGA
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Protein sequence | MLHKGRLSTK LKPHYVVEGS LMMPGKTASK VDGYLFQQGV VCALRTLAGA WFVMAVSVSP AQAACAPDGQ GGITNSGGTC SVAPPVNRIT ATGSGTTTAP GVTLAVPYGI AVTASGGASV SLGRSDAGGA PAISALNGGG LTGLFATGVS STITADSLAI GLPSGGGNAA ARATAGGHIT FLNSANITFV PGGGGGTGLL ADGAGSQITG TNVTVAGAGG GGDYVAHSNN GGDIALTGGA LSLNSPGGGG VAVLSENGST FTGDGVAISV SASGGDAAVK SVGNSHVSLS GGSVTLNGTS GETGLLAQGA TLTAVGVPVS VTASQSSAGT VQGGGTLAIT GGSVTASGSG TVGMLVNGAA GAANTLALND TTVTSTADSL HVVGANANIT AAGSTITDNN GVLLSTTGSP STTTFDAGAS TLGGAITTGA GTTTTVTLHD DTDWTVTGNS TATNLTNSAS NIHFTAPADP SQAASYKTLQ VQNYTGADGN LHLNTFLGSD DAPSDKLIVS GGTATGTTNL TIHNTTGPGD MTVADGIQVV QTLNGGTTAS DAFTLTGRLR AGAFDYLLFH GGIGGSRPND WFLRSSFVVP ESITPTVPLS PATPSSPPGE PGTPSSPPGE PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ PGAPSSPPGQ PETPSSPGQP GGQTTLDVSR PFPADPPASP LQPGVTYPVI GPELATYGVV QPVARQMGFT MLGTLHERIG DTLTADNAGP DSEGWGHSGW ARFFGQQIDN RYQAFASPRA TGQLLGVQAG VDVWRGSLMP GHRDVAGVYF AYGNSNLDVD GLVTNATATA YLLGRTGKLN LDAYSGGAYW THYGPGGWYL DLVLQGTSYQ GEATTQSARL PTTGDGFVTS LEAGYPVPLP LGPRFVLEPQ IQVLWQRVSF DQENDGLGPV DLGSTTGTTG RLGLRGQWTI DGDHGQVWQP YGRVNLWHDW GGRATTLFGV DQVPLRDAAT RLEFAAGVTA KATLRLSLYA QAGYQFAVGA GENSRRQGVQ GNLGLRYTW
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