Gene Bxe_C1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1260 
Symbol 
ID4010772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1317051 
End bp1317779 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID637953850 
Producthypothetical protein 
Protein accessionYP_556470 
Protein GI91781263 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0234985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAC ACGCGGCGCG CCATGACTGG CGCATGGACC GACCCGGTGA TGCGCGGTTG 
CGGGCGGCCG TCCTGATGAT GGGCGCGTGC TGCGCCGTCA ATGTCGGCGG CGCCGCGCAA
TCGCATTCCG GCAGACTTCT GCGCAGCGGC ACCGCATTTT TCGTCACGCA TACGGGCGAC
ATGCTGACGA GCGCGCATGT GGTGCGCGGC TGCAAGGCGA TCGCCGTGTG GCCCCGCAGC
GAGGCGGCCG TGCCGGCGTC GCTGATCGTC ACCGATGACC GGCTGGATGT CGCGTTACTC
GCCACGCGAC GCGCGGTCGA TGCCATCGCG GTGCCCACGG ACCGGCCGGT TGCGGCCGGC
GCTTCGGTTT ACACGATCGG CTTCGGCCTG ACCCCGTCGT CGCCGCGCGT GCCGGTGCTG
ACGCATGGCT ATGCGACGGG TGCCGCGTAC GTGAACGGCC ACCGCTTGCT GGTGTTGCAT
GCCGACCTCC GTGAAGGCAA CAGCGGCGGC CCGGTGATCG ACGCGAGCGG CCGGCTCGCC
GGAATGATCG TCGGCCGCTA TGCCGATGCG CCGGGGTCCA GCGTGGCGGT GCGCACCGAG
GATCTCGCCG GACTGCAAAG CACGCCGCGC CCCGCCGCCG AACGCCCCGT CCAACCGCTT
GCCGCCGAAA ACTGGCGAGC GCGGCTCGAA ACAATCGCAG CGCTCGTTCA ATGCATCGAC
GACAGTTGA
 
Protein sequence
MRQHAARHDW RMDRPGDARL RAAVLMMGAC CAVNVGGAAQ SHSGRLLRSG TAFFVTHTGD 
MLTSAHVVRG CKAIAVWPRS EAAVPASLIV TDDRLDVALL ATRRAVDAIA VPTDRPVAAG
ASVYTIGFGL TPSSPRVPVL THGYATGAAY VNGHRLLVLH ADLREGNSGG PVIDASGRLA
GMIVGRYADA PGSSVAVRTE DLAGLQSTPR PAAERPVQPL AAENWRARLE TIAALVQCID
DS