Gene Bxe_C1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1234 
Symbol 
ID4010746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1289425 
End bp1290528 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID637953824 
ProductABC spermidine/putrescine transporter, ATPase subunit 
Protein accessionYP_556444 
Protein GI91781237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0541634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATAG CCGATTTGAC TTTGATGGGT TTGACCAGGA CCTATGGCGA GCAAGCCGTG 
GTCAGCGGGA TCGATCTCGA AGTGCCGCAA GGCGCGTTGC TGTCGCTGCT CGGGCCGAGC
GGTTGCGGCA AGACCACGTT GCTGCGGATG ATCGCCGGCC TGCTCGAGCC CTCGAGCGGA
GACATTCTGT TTCGCGGCAA ATCGGTGAAG GACGTGCCGG TGCACAAGCG CGGCGTCGGC
ATGTTGTTCC AGGACTACGC GCTGTTTCCC CACATGACGG TCGAGAGCAA CGTGCGCTTC
GGCCTGGAAA TGCGCATGCG CGACAGGCGG CGTCATCAAG CGCTGGTGCT CGAAGCGCTC
GACATGGTGC AGCTCGCGCA CCTCGCCGAA CGTTTTCCGC AGGAATTGTC AGGTGGCCAA
CGACAACGCG TCGCGCTCGC GCGAGCGATC GTGACCGAGC CGGCGTTCCT GCTGCTCGAT
GAGCCCTTCG GCGCGCTCGA CAAGAACCTG CGCCTGGAGA TGCAGATCCA GCTGCGCGAG
ATCCAGACCA AGCTCAAGAT CACGACGGTG ATGGTCACGC ATGATCAGGA AGAGGCGCTG
TCGATTTCCG ATCTGGTGGC GGTGATGCAG GGCGGCCGGA TCGCCCAGCG CGGCACGCCG
GCTCAAATCT ATACCGATCC GTCGTCGCGC TTCGTTGCGT CGTTCATCGG TGCATCGAAC
CTGATGCGGG GCCGGGTTGC ACAGCGCGAA GGCGATGCGC TGGTGGTCCA TACCGAGAGC
GGCCTGCGAG TTTCGGCGGC CGTGATATCT GCTCCCCCGG CAATCCCGGC CGCCGACCAG
GGCGAGGTCA CCGTGATGAT GCGACCCGAG TCGATCCGGA TGGAACCGGT TGGCGGTGCG
GGCGACGACG GTCTGGACCG GGCGAGCGGA ACCGTGACGC GCGTTGTGTA TCGCGGTGCG
GCGATCGAGT TCACGGTGCA GTTGCGCTCG GCGCACACGC TGGTATGCCT GCAACCGAGT
TCGCCCATGC AACGCGCGGT CGGTGTCGGT ACGCAGGTAA GCTTGCGTTG GGATGAGCGC
AGCGCGCGCA TTGTCTGGCA CTAG
 
Protein sequence
MPIADLTLMG LTRTYGEQAV VSGIDLEVPQ GALLSLLGPS GCGKTTLLRM IAGLLEPSSG 
DILFRGKSVK DVPVHKRGVG MLFQDYALFP HMTVESNVRF GLEMRMRDRR RHQALVLEAL
DMVQLAHLAE RFPQELSGGQ RQRVALARAI VTEPAFLLLD EPFGALDKNL RLEMQIQLRE
IQTKLKITTV MVTHDQEEAL SISDLVAVMQ GGRIAQRGTP AQIYTDPSSR FVASFIGASN
LMRGRVAQRE GDALVVHTES GLRVSAAVIS APPAIPAADQ GEVTVMMRPE SIRMEPVGGA
GDDGLDRASG TVTRVVYRGA AIEFTVQLRS AHTLVCLQPS SPMQRAVGVG TQVSLRWDER
SARIVWH