| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1232 |
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| Symbol | |
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| ID | 4010744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1287219 |
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| End bp | 1288427 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637953822 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556442 |
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| Protein GI | 91781235 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000106128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGAT TAGGAATCCT TGTTTTATCG GCAACAACCG GTTTTGTCTC GGGTGCGGCT
TGGGCGGAGA ATTCGGTGAC GCTGTACGGC ATCGTCGATG CGGGCATTCA GTACAACAGC
GACGTCGCGG TTGCGCAGAA CATAGGTGCC GCGGGGCGGC CGGTGAACTA TGCGAGCAAG
GGACGGCTCG GCTTTCAGAG CGGCGCCGAC TACGGCGACC GCTGGGGCCT GAAGGGCGTC
GAAGATCTGG GGGACGGCTA TACAGCGATC TTCCAGCTCG AGAATTGGTT CAACATCGGC
AATGGCGCGT TGAACGTCAG CAGCAGCACA TTGTGGGGCC GTCAGGGGTA CATGGGCTTG
AACAGCACGC GCTATGGTAC CTTGACCTTC GGGCGCCAAT ACGACGTAAC CAACGACCTG
GTCGAGTATT ACGGGCCGGA TTCCGCGGGC GGAATCGGCA CCTATCCGGG CGACTTGTCG
AACTTCGACG GAAGTATTCG CATCAACAAC TCGATCAAGT ACCGCACGCC GACCATCGAT
CACCTGACTG GCGAGATCGT TTATGGCTTC GGTGGGGTAG CGGGATCCGC ATGGCGGAAC
AGCACGCTGA GCGTCGGCGC AAATTACGTC GCGGGGCCGG TCGCGGTGGG TGCCGCGTAC
ATGCGGATGG ATAACAGCGG GGCCACCGGC AATACGTGGT CGTCGGCATC GGCGGACAGC
AATTTCGGTT CGTCGGTCAC CGCCGGTTTC GCCGGCGCGC GGGCGGTGCA GACTGCCAAC
GCGATCGCGG CATATACGTT CGGCACGCTG ATGCTCGGTG TGAACTATGG CTACACGCAG
TATCGGCCGT CGGCGCTGTC ATCGTTCCAT CAGGTGGTCG CCTACAACTC CGCCGGTATC
GCGATGCGCT ATCAGTACAG CACCACAATG AGCTTCGCAT TGAGCCCGAC CTACACGCGC
GGGCAATCGG TCGGCGACGG GAAAGCGCGG CCGTGGTACG CAAGCATCGC CGGGGTCGGG
TTCTACAATC TGAGCAAGCG CACCTCGTTC TATTTGTACG GTGGGTATCA GCGTGCGGGT
GGCGATACGT TCGACGCGTT CGGCAACCTT GTGGCGGCGA CGCCGTCGCT CGGCGACGCC
GCCAACGGTT CTTCGTCGGG GTCTCGCAAT CAGGCGTTGA TCCGCATCGG GATGTTCAAC
AAGTTCTGA
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| Protein sequence | MNRLGILVLS ATTGFVSGAA WAENSVTLYG IVDAGIQYNS DVAVAQNIGA AGRPVNYASK
GRLGFQSGAD YGDRWGLKGV EDLGDGYTAI FQLENWFNIG NGALNVSSST LWGRQGYMGL
NSTRYGTLTF GRQYDVTNDL VEYYGPDSAG GIGTYPGDLS NFDGSIRINN SIKYRTPTID
HLTGEIVYGF GGVAGSAWRN STLSVGANYV AGPVAVGAAY MRMDNSGATG NTWSSASADS
NFGSSVTAGF AGARAVQTAN AIAAYTFGTL MLGVNYGYTQ YRPSALSSFH QVVAYNSAGI
AMRYQYSTTM SFALSPTYTR GQSVGDGKAR PWYASIAGVG FYNLSKRTSF YLYGGYQRAG
GDTFDAFGNL VAATPSLGDA ANGSSSGSRN QALIRIGMFN KF
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