Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1142 |
Symbol | |
ID | 4010654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 1197624 |
End bp | 1199102 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637953737 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_556357 |
Protein GI | 91781150 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.258577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.581397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGTA TGAGCAGGAT CGCCGCGGTA AAGCTTCCCG CGCTGCTGGC CAGCGTCTGC GCGCTCGCGG CGTGTTCCCT TGCGCCGGAC TACCATGTGC CGACGGCGCC GGTCGCCGCG CAATACCACA CAGTGGGACC GTGGGTCAAC GCGCAGCCCG CGGACCAGTT AACGCGCACC GACTGGTGGA ATATCTATAA CGACCCGCAA CTCGACGATC TCGAACAGCG TCTGCTCGCG AACAATACCG ATCTTGCCGC GTCCTACGCC CATTACCGGC AGGCCATGGC ATTCGTCGAT CAGGTCTCGT CGAATCTGTT CCCGCGGATC AGCGCGAGCG CGGTTCCGCA GCGTGACCGT CAGTCCGACA CGCGGCCATT GCGCGCCGGC GGGCCCGATT ACTACAACTC GGCCACGCTC GGCGGCGAAA TCGATTACGA CCTCGATCTA TGGGGCCGCG TGCGCGATTC CGTGGCGGCG GGCAAGGATG AAGCGCAGGC CACCCAGGCC GATCTTGCCT CCGCGCAACT GAGCCTGCAG GTTCAACTCG CCGACAGTTA TATCCGCCTG CGCGGGCTGG ACCAGCAAAC CCGGTTGCTG ACCGACACCG TCGCGGCGTA CGCGCGCGCA TTGGAACTGA CGCAAACGCT GCATGGCGGA GGGATTGTTT CGGGGCTCGA CGTATCGCGC GCGAGGACGC AGTTGTCGTC GACGAAATCG CAGCTGTCGC AGAACCTTGC ACAGCGCGCG CTGATCGAGC ACGCGATCGC CGAGCTGATT GGCGCGTCCG CATCCGAATT CAGTCTGGCG CCGAAAACCG CATTGATCGC ATTGCCGGTC ATTCCGGTCG GCGTGCCGTC GACGTTGTTG CAACGACGTC CGGATATCGC GGCCGCCGAG CGTCGCGTGG CGGAGGCAAA TGCGAAGATC GGCGTGGCAC GCGCCGCTTA TTTCCCGTCC ATTACGCTGA GCTTGCAAGG CGGCGTCCAG AGCGCCGCGT ATGCCGGGTT GGTCAGCGCA CCGAACATTT TCTGGGCGAT CGGTCCGCAA CTCGTGCAAT ACGTTTTCGA CGGCGGCTTG CGCCGCGCGC AACTCGACTC GGCGAAAGCG GCCACCGACG AAGCGGGCGC GCGTTATCGC GGCGTCGTGC TGTCGGCGTT CCAGCAAATC GAAGACAATC TTTCGCTGCT CCAGGACCTC GGCACCGCGC TTGACCAGCA GCGCGATGCC GACGATTCGG CGCAGCACGC CGTCGACCTG GCCTTGAACC GCTACCGGCA GGGCACGGTC GGCTATCTCG ACGTGGTACA GGCGCAGACG GCGGCGCTCG ATGCACAACG CGGCGTGCTC GATCTCCAGA CCCGCTTGCT GAGCGCGAAC GTGCAACTGG TCAAGGCGCT CGGCGGCGGC TGGTCGAGCC AGGAACTCGC GACCGCCGCG CATGCTCCAG CCCTGGTCGC AGCCCGCGGT TCACCATGA
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Protein sequence | MASMSRIAAV KLPALLASVC ALAACSLAPD YHVPTAPVAA QYHTVGPWVN AQPADQLTRT DWWNIYNDPQ LDDLEQRLLA NNTDLAASYA HYRQAMAFVD QVSSNLFPRI SASAVPQRDR QSDTRPLRAG GPDYYNSATL GGEIDYDLDL WGRVRDSVAA GKDEAQATQA DLASAQLSLQ VQLADSYIRL RGLDQQTRLL TDTVAAYARA LELTQTLHGG GIVSGLDVSR ARTQLSSTKS QLSQNLAQRA LIEHAIAELI GASASEFSLA PKTALIALPV IPVGVPSTLL QRRPDIAAAE RRVAEANAKI GVARAAYFPS ITLSLQGGVQ SAAYAGLVSA PNIFWAIGPQ LVQYVFDGGL RRAQLDSAKA ATDEAGARYR GVVLSAFQQI EDNLSLLQDL GTALDQQRDA DDSAQHAVDL ALNRYRQGTV GYLDVVQAQT AALDAQRGVL DLQTRLLSAN VQLVKALGGG WSSQELATAA HAPALVAARG SP
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