Gene Bxe_C1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1051 
Symbol 
ID4010563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1088933 
End bp1089469 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID637953648 
Productsigma-24 (FecI) 
Protein accessionYP_556268 
Protein GI91781061 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC GTCTGCGGAG GCAGTTCAAG CGCGAACCGG CGCTTGGCGA ACGGGCTTAC 
CTGCTGGGTG AGGAGTTCAG GAGAAGCTAT GACTGGCTCA AGAGTCGTCT ATGGCGCAAG
GTCGGATGTC CGTTCGTTGC CGAGGACCTG AGTTCCGAGG CGTTCGTACA ACTAGCCGAA
GTTCCGGACA TTCGCGCCAT CCGCGAGCCG CGCGCGTTAT TGACGACTAT TTCGCAACGA
CTCGTATTCG ACTTCTGGCG GCGCCGGGAT CTCGAACAGG CCTACCTGCG GGAACTCGCG
TATGCGCCTG AAGCCGTCGC CTGTTCGGAG CAGGAAACCC ACGAAATGGT GCAGTTGCTG
ATCGAAATCG ACCGGCGTCT GTCGGGATTG CCGGAGAAAG TCCAGCAGGC GTTTATGTAC
AGCCAGCTGG ACGGCATGAC CTACGCTGAA ATCGCGAGCC TGCTGGACGT GTCGGTCAGC
ATGGTCGGTC AATATATGAC GAAGGCTCTC AAGCATCTGA TGAACGTCTC CCCATGA
 
Protein sequence
MENRLRRQFK REPALGERAY LLGEEFRRSY DWLKSRLWRK VGCPFVAEDL SSEAFVQLAE 
VPDIRAIREP RALLTTISQR LVFDFWRRRD LEQAYLRELA YAPEAVACSE QETHEMVQLL
IEIDRRLSGL PEKVQQAFMY SQLDGMTYAE IASLLDVSVS MVGQYMTKAL KHLMNVSP