| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1012 |
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| Symbol | |
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| ID | 4010525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1049440 |
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| End bp | 1050567 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637953615 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556235 |
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| Protein GI | 91781028 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000562807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TCTTAACAGG GGGCGCGCTC CTGCTGGCGT TTCCGCTAGT CCACGCACAA
AGCAGCGTGA CGCTTTACGG GCTTATGTCG ACGGCGATCG AGTATATCAA CAACGAAGGC
GGGCATTCGA ACTTCAAGAT GCTTTCAGGG ACGATGCAGA ACAACCGTTG GGGCTTGCGC
ATCGTCGAAG ATCTGGGCGG AGGAATGTCG GCAGTTGCGA CGCTGGAAAA TGGATTCGAC
GGAACAAGTG GTGCATTCCA GCAAGGGGGG CGCATGTTTG GGCGTCAGGC ATGGGTCGGT
TTGAGCAGCA CGCAGATAGG CCGGGTGACC CTGGGGCGTC AATACGACAT GTTCTGGGAT
TATATGCAAC AGTTCGAGGC GGCGACAGCG GCCAATGGAC TTGCAGTTCA CATCGGAGAC
AATGACAATG CATTCGGCGG TTTCCGTTAC AACAATTCGG TGAAATATCT CAGCCCGAAC
TGGGCCGGTT TCACTGTAGA GGCGCTCTAT GCGTTCAGCA ATCAGGCCGG TGATTTCTCT
TTAAACCGCG CGATGAGTTT CGGCGCTTCC TATAGTCACG GGCCCATACG CGTTGCGGTT
GCTTATCTCG ACATTGACAA GCCGGGGGTC AGTAATCCGT CGGGTGCCGC GACTGACGAC
TATTCGGGCA CACCGCCATT TATTCTGTTT CATACCAGTC CGCTCAGCAA GACTGTAGGT
GTCGACCGCC AACGCCAATT CGGTGCCGGG GGCGCCTACT CGCTGGGGCC GGTGACATGG
AATCTGCTCG TGACTGACGT TCGCTTCCGG TACCTTGATA CGACGTCGTT ACACCTCGAC
AACTATGACA CTTCACTGAC ATACCAGCTC ACTCCCAGCG TACAACTCGG TGCAGGATAT
ATTTTCACGA CCGGGAACTA TGGGAATGTT GGCGATAACT CATCGATGCA TTGGCATACC
GGTCAGCTAA GCGTCGATTA CTCGTTGTCG AAGCGGACCG ATGTGTATCT CTTCGGCGAT
GCAGTATTCG CATCCGGTGC GCGCGCAGTC GCCGTAACGT GGCTCAACTC GCCGTCGAGC
ACCAAACGTC AGATCAACGC GATGGCTGGC ATCCGTCACA AGTTCTGA
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| Protein sequence | MKKFLTGGAL LLAFPLVHAQ SSVTLYGLMS TAIEYINNEG GHSNFKMLSG TMQNNRWGLR
IVEDLGGGMS AVATLENGFD GTSGAFQQGG RMFGRQAWVG LSSTQIGRVT LGRQYDMFWD
YMQQFEAATA ANGLAVHIGD NDNAFGGFRY NNSVKYLSPN WAGFTVEALY AFSNQAGDFS
LNRAMSFGAS YSHGPIRVAV AYLDIDKPGV SNPSGAATDD YSGTPPFILF HTSPLSKTVG
VDRQRQFGAG GAYSLGPVTW NLLVTDVRFR YLDTTSLHLD NYDTSLTYQL TPSVQLGAGY
IFTTGNYGNV GDNSSMHWHT GQLSVDYSLS KRTDVYLFGD AVFASGARAV AVTWLNSPSS
TKRQINAMAG IRHKF
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