| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1003 |
|---|
| Symbol | |
|---|
| ID | 4010516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1038454 |
|---|
| End bp | 1039602 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637953606 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_556226 |
|---|
| Protein GI | 91781019 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.437001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCT TCATAAAAAG CGTTATTGCT GCTTCGCTGC TGGCGTTGTC CACCTGCGTT
CTGGCGCAGA TCAAGGTAGG CATTACCATT TCCGAGACGG GAGGCGCGGC ATCCATTGGC
GCGATCTCAC GCAAGGTCTT TCCTTTATGG CCGCGTGAGA TTGCCGGTCA GTCCATCGAA
TACATCGTGA TGGACGACGG CTCCGATCCG GGCAACGCCG TGCGCAACGC GCGCAAGCTG
ACCAGCGAGG ACAAGGTGGA CGTGTTGATC GGTTCGAACA CCTCGCCGAA CTCGATCGCG
ATGATTCCCG TTGCGCAGGA GACCGCGACG CCGCTGATTT CGCTGGCATC AGCCCTCGCG
ATTGTCAGTC CCATGGACGC AGCACGGCAC TGGGTATTCA AGACCGTGCA GAACGACCAG
AGCATGATCG ACGCCGTGCT GGCCGACATG TCCCGCCGCC ATGTCAAACG CCTGGGTTAC
ATCGGTCTGG CCGATGCTAC CGGAGAGGGC TACCTGAAAG CGATTCAGGC AATGGCGCAA
GGGCGCGGCA TCACTTTGGT GGATATTCAG AAATACAACC GTAACGATCA GAGCGTGGCA
GCGCAAGGGC TGCGCCTGGT AGCGGCGAAC CCTGACGCGA TCTTTGTCGC CTCGCTGGGG
ACATCGGCGG CATTGCCTCA ACTCGAGTTG GTCAATCGCG GCTACAAAGG GTTGATTTAC
CACACGGGCG GCGTCGCAAA CGACGACTTC CTGCGTGTTG CCGGTTCTTC GGCTGAAGGC
ATTTATCTTC CGCTGGGCGG CTTCCTGGTG GCCGGACAAT TGCCGGATTC GAACCCCACA
AAACGCCTTT CGATGGACAT CGCGGCAGCC TACGAAAAGC AGAATGGCCC AAACACGCGT
AACGTCTTTA TTTCGTATAC CTACGACGCG GTGCTGATGC TTCAGAACGC CATTCCTTCC
GCGCTGAAAA AAGGCAAACC TGGGACACCC GCTTTCCGTT CGGCCCTGCG CGATGCGCTG
GAGCAGATCA AGGACCTGGT GGCGACCAAC GGGGTGTACA CCATGTCGCC GACCGACCAC
ACGGGTCTGG ATACACGATC CATTTTCATA GTGACGGTCA CGAACGGCAA ATGGGCACTG
GCCCATTGA
|
|---|
| Protein sequence | MTLFIKSVIA ASLLALSTCV LAQIKVGITI SETGGAASIG AISRKVFPLW PREIAGQSIE
YIVMDDGSDP GNAVRNARKL TSEDKVDVLI GSNTSPNSIA MIPVAQETAT PLISLASALA
IVSPMDAARH WVFKTVQNDQ SMIDAVLADM SRRHVKRLGY IGLADATGEG YLKAIQAMAQ
GRGITLVDIQ KYNRNDQSVA AQGLRLVAAN PDAIFVASLG TSAALPQLEL VNRGYKGLIY
HTGGVANDDF LRVAGSSAEG IYLPLGGFLV AGQLPDSNPT KRLSMDIAAA YEKQNGPNTR
NVFISYTYDA VLMLQNAIPS ALKKGKPGTP AFRSALRDAL EQIKDLVATN GVYTMSPTDH
TGLDTRSIFI VTVTNGKWAL AH
|
|---|
| |