| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0973 |
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| Symbol | |
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| ID | 4010486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1005578 |
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| End bp | 1006759 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637953577 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556197 |
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| Protein GI | 91780990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000310087 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CCGGCAGGGA TCGCGATGTG TCGTTCGAAC AGGAAATCAA GACCAAGGAG
ACGGAATACC AAATGAAGAA GATTCCTATC ATCGCTGTCG CCGCATTGTC CGCCTATGCT
TCCTCAGCTT ACAGCCAGTC CTCCGTCACG CTCTACGGGC TGATTGACGA GGCGATCCGG
TTTGATAATC ATCAAACGCC GTCGGGTGGC CATAACATCA CGATGGGAAC CGGCGGAGCC
ATCCTCGGAA GCCGCTGGGG GCTGCGCGGC GTGGAGGACC TGGGCGGCGG AACGAAGGCG
CTCTTCACGC TTGAATCGGG CTTCATTGCG AATACCGGTG CGATGGCATT CCCGACGCCG
AACGGGCAGA CCCGGGAATT CGGCAGGCAG GCCTTCGTTG GGCTGTCGCA GTCCGGCTGG
GGCACGCTGA CGTTCGGCCG CCAGTATCTG CTCGCTTACA CGATGGGCGC ATCGCACGAC
ACGTTCGCAT TCGCGAATTA TGCCGCTACC TGGGGATTCC AGTCCGCCGG CCTCGTGGGT
GGCGCGCGCC TCGACAACAC GGTGCAATAC AGCTCCGACA GCTTGCATGG CTTCAAGGTG
AATGGCGCGT ATACATTCGG CGGCGCGGCG GGCGACGTGC ATCGCAATTC GTCGCCGGCC
GTGAGCGTTA GCTACGACCA TGGCCCATTG AGCATCGGCG CTGTCTACCA GGTCGTGAAC
GACATTGGCG GCGCCGTGCC GGCGGATAGT GCATACGGCA ACACTTACTT TGGGGTCGCC
ATTCCGGACA GCACGCAGAA GCTCTTCATG GCGGGTGCGA GCTGGGCGAC GAATCGCGCG
ACCCTGTACG CGCAGTACAT CTACAGCCAT GTCTATCCGG CGGATTACCG GGACGACTCG
ATGTCGCTCG GCGCGTCATA CCGGTTCACC CCGGCCTGGG AAATCAGGGA GGCGGTCTAT
GTGGACATTC TCCACCATGC GGCCGGCGAA GGAACGCGCA TCACGACCGG CCCGATCCTC
TTCTATCACC TTTCCACGCG AACTGATCTG TACACGGGGT TCAACTACAA CCATCTGACC
GGCCAGTGGA TCAAACTGGC ATCGAGTTCC GGATTTACGC AGTCGTTCAA CGGTTACAAC
TCATTGTTCG AAGGAGTACT GGGGATGATT CACCGATTCT GA
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| Protein sequence | MTQSGRDRDV SFEQEIKTKE TEYQMKKIPI IAVAALSAYA SSAYSQSSVT LYGLIDEAIR
FDNHQTPSGG HNITMGTGGA ILGSRWGLRG VEDLGGGTKA LFTLESGFIA NTGAMAFPTP
NGQTREFGRQ AFVGLSQSGW GTLTFGRQYL LAYTMGASHD TFAFANYAAT WGFQSAGLVG
GARLDNTVQY SSDSLHGFKV NGAYTFGGAA GDVHRNSSPA VSVSYDHGPL SIGAVYQVVN
DIGGAVPADS AYGNTYFGVA IPDSTQKLFM AGASWATNRA TLYAQYIYSH VYPADYRDDS
MSLGASYRFT PAWEIREAVY VDILHHAAGE GTRITTGPIL FYHLSTRTDL YTGFNYNHLT
GQWIKLASSS GFTQSFNGYN SLFEGVLGMI HRF
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