| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0970 |
|---|
| Symbol | |
|---|
| ID | 4010483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1003034 |
|---|
| End bp | 1003945 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637953574 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_556194 |
|---|
| Protein GI | 91780987 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0205462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCA CCTTCAACCT CAACAACGTC ATCACGTTTC TTGCCGTGGC GGAAACGCTC
AGTTTCCGCC GGGCGGCGGA ACACACGCAC ACGTCTCAGT CGGCTGTCAG CGCCCGGGTC
AGCCAGCTTG AAGACCGGCT TGGTGTGCGC CTGTTCCATC GGACGACACG GCAGGTCACG
CTGACGGCTG AAGGTCTGCA ACTCTTCGTT GTCGCCAGGA CCGCCGTCGA GGATATGGAG
CGGGTGGCCG AATCCCTGCG GAAGAAAGCG GCTCTTCAGA GCGGTGAACT GACGATCGCC
GCTGTCCCAT CGATTGGCCA GACGGTGCTG CCCACCATCA TGGGCGAGTT TCATCGCCGC
TATCCGGGCG TGACGCTGAA GTTGCTCGAT GTGGATTCCC AACGGTGCAT CGAGATGATG
GAAGCAGGCA GTGTCGATCT CGCCATCGTG TCCGATCTCG AAGACCGTCA CGACATCGTA
TTCGAGCCGC TCTTCCGGGA CGAATGCTTC CTCGTCGTAC CGCGAACGCA TGCGCTTGGC
GAGCGGCGCA GCATTTCGCT ACGCGAAGCA GCGAGCTTTC CTCTGATGGC CAGTCCCAGG
GGGACCACCC TATGGCAGAT CATCGAGCGC GCGTTTGCGG CCTGCGGTGC GACGCCGGTC
GCTCATCAGG AGACCTGGAA TATGTCGACG CTCGTACGAC TGGTCGAGGA GGGCTTCGGC
ATGGGAATCG TGCCTGAGAT TTGCCTCGGC AAGCTCGATG TGTCGCGCTG CACGGTGCTT
TCGCTGGAGG AACACGTGGG ACGCATGATC GGGGTGGCAC GCATGACAAA CCGCTCGGAA
TCGCCCGGTA GTAAGGCGTT CCGGCAGCTG CTCGGCGAGC GGACGCCGCC TTTGCGCGCG
GTGCGGCAGT AG
|
|---|
| Protein sequence | MALTFNLNNV ITFLAVAETL SFRRAAEHTH TSQSAVSARV SQLEDRLGVR LFHRTTRQVT
LTAEGLQLFV VARTAVEDME RVAESLRKKA ALQSGELTIA AVPSIGQTVL PTIMGEFHRR
YPGVTLKLLD VDSQRCIEMM EAGSVDLAIV SDLEDRHDIV FEPLFRDECF LVVPRTHALG
ERRSISLREA ASFPLMASPR GTTLWQIIER AFAACGATPV AHQETWNMST LVRLVEEGFG
MGIVPEICLG KLDVSRCTVL SLEEHVGRMI GVARMTNRSE SPGSKAFRQL LGERTPPLRA
VRQ
|
|---|
| |