| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0926 |
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| Symbol | |
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| ID | 4010439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 960982 |
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| End bp | 962142 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637953531 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556151 |
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| Protein GI | 91780944 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.412323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.203503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAT TCAGAAAAAC AACCCTACTG CCCACGGCGG CTTTCGCGTT GCTGTCGGCA
GTTGCGGTCA ACGCTTATGC GCAAAGCAGC GTCACGCTCT ACGGCCTCGT CGAGGACGGC
CTGATTTATA CCAACAACCA GCAAGGCCAC GCGAACATCC AGGCCACCAC TGGCCAGACC
AATACGAGCC GCTTCGGCGT GCGCGGAATG GAAGATCTGG GCGGCGGCTA CCGGGCCGTG
TTCACGTTAG AGAACGGCTT CGATGCCTCT ACGGGAAAAT TAGGCCAGGG CGGACTCGAG
TTCGGCCGGA CGGCGAGCGT CGGCCTCGCG ACGCCTTACG GCACCGTGAC CGCGGGCCGG
CAATATGAGC CGGTCAGCGA GTATCTCGGC GGCTTGAGCA GCGCGTTGCA GTGGGCTGGA
TGGACAGGCG CGCATCCGGG CGACATCGAC AACATGCAAT CGACGATCCG TTTTAATAAC
TCCGTCGAGT ACACGAGCCT CACCTACGGC GGCTTCTCGT TCAAGGCCAT GTTCGCGCCG
GGTGGCGTGG CAGGCGACTT CTCGCGTGCG CGCGCGATGA GCTTCGGCGC GGGTTGGCAG
GGTGCTTATG GCGGCGTGTC GGCCGCATAT CTGAACATGA ACGATCCGTC CGAGTCGGCG
TATGCGGGAT CGATTCTGCC AGGTCAGGCA GGTTATACGT CGCCGGCGAC GAGTCCGATA
TACCGCGGTT ATGCGTCGGC GGATACGCTG CAGATCGTCG GCGCCGGCGC CAATCTGCAA
TTCTCCGGCG TACGGCTCGA TGCGATCTAT ACGAACACGC GCTACCAGAA CGTTGTGCCG
ACCGCCACGA CGCCCTATCG CGGCGGCACC GCGCAGTTCA ACACAGTGGA ACTGAACGGC
AGCTACCGGA TCGTGCCGAG CGTTCTTGCC GGTGCAGCCT TTATCTACAC GAAGGGGGAA
ACGGCGAATT ACCTGCAGTG GAATCTGGGC GCGGACTACG CGCTGTCGAA ACGGACGGAC
ATCGGTCTGG TCGGCGTGTG GCAACGCGCG TCGGGCACTG ATTCGACTGG TAAGCCTGCT
GTAGCCAGTA TCGCCAGTCT GACGGCATCG AGCACGAACA GTCAGGTAGC GGTTCGCCTG
AATCTGCGGC ATCGATTCTA G
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| Protein sequence | MTSFRKTTLL PTAAFALLSA VAVNAYAQSS VTLYGLVEDG LIYTNNQQGH ANIQATTGQT
NTSRFGVRGM EDLGGGYRAV FTLENGFDAS TGKLGQGGLE FGRTASVGLA TPYGTVTAGR
QYEPVSEYLG GLSSALQWAG WTGAHPGDID NMQSTIRFNN SVEYTSLTYG GFSFKAMFAP
GGVAGDFSRA RAMSFGAGWQ GAYGGVSAAY LNMNDPSESA YAGSILPGQA GYTSPATSPI
YRGYASADTL QIVGAGANLQ FSGVRLDAIY TNTRYQNVVP TATTPYRGGT AQFNTVELNG
SYRIVPSVLA GAAFIYTKGE TANYLQWNLG ADYALSKRTD IGLVGVWQRA SGTDSTGKPA
VASIASLTAS STNSQVAVRL NLRHRF
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