Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0914 |
Symbol | |
ID | 4010427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 948619 |
End bp | 949923 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637953519 |
Product | major facilitator transporter |
Protein accession | YP_556139 |
Protein GI | 91780932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00481205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.205021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCA TACCGCCAGG GAGATGGTTC CGCAAACTGC GGTTGACCAT GGGTATGGCG ACTTTTTTCG ATGCTTTCGA CTCGCTGGCT ATTGCGGCAG CGTTGCCGGC GCTGTCGGCA ATCTGGCATC TGAAGCCGAC TGACATGGGT GTGCTGATCT CGGTTGGCTA TGCCGGCCAA CTGCTGGGAG CACTGGTACT CGGTCGCTTG GCCGAGGCGC GGGGTCGAAC CAACGCGGCC CTTATCTCTG TGGCGATTTT CACGTTGTTT TCCGCGCTTT GTGCCCTCGC GCCGTCATAT ACCTGGCTGT GCGCGTGCCG ATTTCTTCAG GGGGTGGGGC TTGGGGGCGA AGTGCCGATT GCGGCGGCTT ACATCAACGA ATTTAGCCGG GCCAAGGGAC GGGGGCGTTC CTTCGTGCTA TATGAAGCGA GCTTCACGTT GGGTTTGGTG TTTTCAAGCC TCGTAGGCGC CTGGATCGTG CCGCAAATGG GGTGGCGGGT GTTGCTGGCT TTGGGTGCTG TTCCGGCTGT CATTATCCTT TGGGCGCGTC GCAGTCTGCC CGAATCTCCA CGCTGGCTTG CGGAGCACGG GCGCCTTGCC GAGGCCGATG AAGTCGTCTC GCGGATTGAG CGTAGCGTAG AAGAAGAAGG CAAGACGCTG CCTCCGCCAG CCAAAGCAGT TCCACGGCCA GCGATGGCGC GAACGCGTAT TTTGACCCGA ACGAGCCTGG TGCGAAGTCT GTCAGTCTGG GCAATGTGGT TTGCATGCTA TTTTCTGTCA TACGGCGTGG GGACCTGGGC TCCCACGATC TTGCGGACTG CTCTGCACTT ACCCTTGCAG CAGGCGCTGC TGTTCTCGTT TGTGCTCCAG ACTTTGTACC TTTGCGGAAC TCTTGGTACG GCAGTGCTTG TCGACAGATT GGGGCGAAAG ATATATTTCC GAGTGGCTTT TGCTGGCGTG AGCATTGCCC TTTTCTGCGC CTATAGCATG GCAGGCAATG AAATTGCCCT GATGGCGTTA ATTGCGGGAG CGTTTGTTTT CAACGCTGCA ATCTCGGTCA CGCTTTACCT GTACACGCCT GAAATTTATC CCACGACGGT ACGGGCAAAG GGAAGCGCAT TTGCAACATC ATTCGCGCGA CTCGCCTCCA TTACCAGTCC CCTGGCTATC GGCGCGATAA TGCAGCACGC CGAGTTTTCG CAGATTTTTC TGATGCTGGG ACTGGTAGCA CTTGTGATAG GCGGAAGCGG TGCCCTGTTC GTAACTGAAA CGCGTAATCG CGTACTGGAA GATATTCCTC AATAG
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Protein sequence | MERIPPGRWF RKLRLTMGMA TFFDAFDSLA IAAALPALSA IWHLKPTDMG VLISVGYAGQ LLGALVLGRL AEARGRTNAA LISVAIFTLF SALCALAPSY TWLCACRFLQ GVGLGGEVPI AAAYINEFSR AKGRGRSFVL YEASFTLGLV FSSLVGAWIV PQMGWRVLLA LGAVPAVIIL WARRSLPESP RWLAEHGRLA EADEVVSRIE RSVEEEGKTL PPPAKAVPRP AMARTRILTR TSLVRSLSVW AMWFACYFLS YGVGTWAPTI LRTALHLPLQ QALLFSFVLQ TLYLCGTLGT AVLVDRLGRK IYFRVAFAGV SIALFCAYSM AGNEIALMAL IAGAFVFNAA ISVTLYLYTP EIYPTTVRAK GSAFATSFAR LASITSPLAI GAIMQHAEFS QIFLMLGLVA LVIGGSGALF VTETRNRVLE DIPQ
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