Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0786 |
Symbol | |
ID | 4010213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 728685 |
End bp | 730265 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637953327 |
Product | peptide/opine/nickel ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_555947 |
Protein GI | 91780740 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGACG ACGAAATCAA AAAGGGCGGT TTCAGCCGCC GTGACATGAT GCGTTTGCTG GCCGCCGGCG GCATGCTCGC CACCGGTGCG GGAGGCCTGC TGGCGGCGGC GAACCCGGCG TTCGCCGCGC CCACGCCGAA GAAGGGCGGC AAGATCCGGG TCGCCTACGA CGCATCGTCT ACCGCGGATA CGCTCGACCC GGCCAAGGGC TCGGCCGGCT CCGACTACAT CCGCTTCTTC ATGTTCTACA GCAGCCTGAC GCAGCTCGAC GCGTCGCTGA CGCCGCAGAT GAACCTTGCG GAGTCGGTGG ACAGCAGCGA CGCGAAGGTG TGGGTAATCA AGCTGCGCAA GGGCGTGATC TTCCACGACG GCAAGGCGCT CGCGCCCGCC GACGTGGTCT ATTCGCTGAT GCGCCACAAG AATCCGGCGA CCGCGTCGAA GGTGAAGACG CTCGCCGACC AGTTCGTGGA TGCGAAGCAG ACCGGCCCGA ACGAAGTCAC GCTGACGCTC ACGTCGGCCA ACGCCGACTT GCCGGTAATT CTCGCTACGC CGCAATTCGT GATCGTCAAG GACGGCACGA CCGACTTCAC GACGGCGGTC GGCACCGGCC CGTACAAGGT GAAGACGTTC AAGCCGGGCG TCTCGACGGT CGGAGTGCGC AACGACAGCT TCTGGAAAAC GGGCGCGGGC CCCTATCTCG ACCAGATCGA ACTGATCGGG ATCGGCGACG ACGCGGCGCG GGTCAATGCG CTGCTCTCCG GCGACGTTCA TCTGATCAAT TCCGTCGATC CGCGCTCGAC GCAGCGCATT TCGGCGACGC CCGGCTATGA GGTGCGCGAG ACCAAGTCGG GCCTCTACAC CGACCTGATC ATGCGCCGCG ACAATCCGAT GTCGGGCAAC CCCGACTTCG TGCAGGGGAT GAAGTATCTG TTCGACCGCG ACCAGGTGCG CAGCGCGGTG TTTCGCGGCT ATGCGGTGAT CGGCAACGAT CAGCCGATTC CACCGGGACA CCGCTATTTC AATGCGTCGC TGCCGCAGCG GCCGCACGAC CCGGACAAGG CGAAGTTCCA CTTCCAGAAG GCGGGCGCGA TCGGCACGAC GCTGCCGCCG ATCTACGCGA CGACCGACGC GAACGGCTCG GTCGAAATGG GCGAGCTGCT GCAGCAAAGC GCCGCGAAGA TCGGCGTGAA TCTGAACATC AATCGTGTGC CGGCCGACGG GTACTGGTCG AATCACTGGA TGAAGCATCC GCTTGGCTTC GGCAGCGTCA ATCCGCGCCC CAGCGCCGAC GTGCTGTTCA CGCAGTTCTT CAAGTCGGAC GCGCCGTGGA ACGAGTCAGG CTGGAACAAT CCGAAGTTCG ACCAGTTGCT GGGCGCCGCC CGTTCCGAAA CGGACGACGC GAAGCGCAAG CAGATGTACG GCGACATGCA GGTGCTGGTG TCGGAGCACG GCGGCATCGG CATTCCGACC TTCCTGAGCC TGCTCGATGC GAACGACAAG AAGCTGCAAG GTCTCGCACC GGTGCCGACT GGCGCGATGA TGGGCTTCAA CTTCGCCGAG TACGTGTGGT GGAACGCGTG A
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Protein sequence | MYDDEIKKGG FSRRDMMRLL AAGGMLATGA GGLLAAANPA FAAPTPKKGG KIRVAYDASS TADTLDPAKG SAGSDYIRFF MFYSSLTQLD ASLTPQMNLA ESVDSSDAKV WVIKLRKGVI FHDGKALAPA DVVYSLMRHK NPATASKVKT LADQFVDAKQ TGPNEVTLTL TSANADLPVI LATPQFVIVK DGTTDFTTAV GTGPYKVKTF KPGVSTVGVR NDSFWKTGAG PYLDQIELIG IGDDAARVNA LLSGDVHLIN SVDPRSTQRI SATPGYEVRE TKSGLYTDLI MRRDNPMSGN PDFVQGMKYL FDRDQVRSAV FRGYAVIGND QPIPPGHRYF NASLPQRPHD PDKAKFHFQK AGAIGTTLPP IYATTDANGS VEMGELLQQS AAKIGVNLNI NRVPADGYWS NHWMKHPLGF GSVNPRPSAD VLFTQFFKSD APWNESGWNN PKFDQLLGAA RSETDDAKRK QMYGDMQVLV SEHGGIGIPT FLSLLDANDK KLQGLAPVPT GAMMGFNFAE YVWWNA
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