Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0745 |
Symbol | |
ID | 4010254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 768790 |
End bp | 771126 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637953363 |
Product | ornithine decarboxylase |
Protein accession | YP_555983 |
Protein GI | 91780776 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.184647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATACG ACCAGATGTT TGGTTTCCTG TTCTGTTGCG CGATGCCATT GCCGCCAACA CTTCCCTCGT CGAGGCTGCA ACGCATCGTC GACGAACTCG GCCGGCTAGG CTACGGCACA ACGATTACAG CCGAGACCGC GGAGGCCAGC TCCGCGATTC GCAGCGACGC ATCGGTGGGT TGTATCGTCG TCGAATGGTC GCTAACCGAA CCGGAGAACG AGGTCGAAGC GTTTGTACGG TTCGTGCGCG AGCGTGGCCT AGACGTTCCG GTGTTCATTC TGGTGGAGCG CCACCTGCTC CAGGAAATTC CGGTGGCGGT GCTGGGTCAT GTGACGGGTT ATATATTCAT CGAGGAAGAC ACGCCGGAAT TCGTCGCCCG CAATCTGGTG AGTCATCTGC ACAGCTATGC CGATTCGTTA AAGACACCTT TCTTCGGTGC CATGGTCGAC TACGCGGAGC AGGCCAACCA GATGTGGACC TGCCCAGGTC ACAACGGCGG GGTGTTCTAC CAGAAGAGCC CGATTGGTCG CGCGTTCGTC AAGCATTTAG GCGAGGCCGT ATTCCGCAAT GACCTGGATA ATTCAGTCAT CGAACTGGGC GATCTGCTCG TGCACGAAGG CCCGGCACTG GCCGCACAAA AGGCCGCCGC GCGGATCTTC GGCGCGGAGC GGACGTATTT CGTGCTCAAC GGCACGTCAA CCTCGAACAA GATCGCCTTG ACCGCGCTGG TTGCGCCGGG CGACCTCGTG CTGTTCGACC GCAATAACCA CAAGGCGGCT CATCATGGCG CGCTGCTGCT CGGCGGCGGC CTACCGGTTT ATCTTCCCAC CGTGCGCAAT GTGCACGGGA TGATCGGCCC GATTGATTTC GAGACGCTCG ACGAGACGCG CATTCGTGAC AGCATCCGGC GCAACCCCCT GATCAAGGAC CCGCAAGCCT GGCAGCGGAA GCGGCCGTTC CGGGTTGCGA TCATCGAGCA ATGCACCTAC GACGGCACGA TCTACGACGT GCAGATGCTC GTCGAAAAGC TCGGTCCGCT GTGCGAGTAC ATCATGTTCG ACGAAGCATG GGCCGGCTTC ATGAAATTCC ATCCACTGTT CAAGGGACAC TTCGCGATGG GTCTCGAAGC TCTGGGAGCG GATGCACCTG GCATTATCGC AGCACAGTCG ACGCACAAGC AGCTGGCGGG TTTTTCGCAG GCCTCCCAGA TCCATGTGAA GGATGCGCAT CTCGATGGGC AACGCAGGCA GGTCAGTCAC CGGCGTTTCA ACGAGATGTT CATGCAGCAT TCGTCGACCT CACCGTTCTA TCCGCTGTTC GCCTCGCTTG ATGTCGGCGC GCAAATGATG CGTGGCCGCT CCGGAGAGGT TTTGTGGGAT GACACGATCA AGCTCGGTAT CGAGATGCGC AAGAAGATCC GCGCCTTGCG TCGCGAATAT GAAGCGACGG AAACGGACGT GGCGCGACAA TGGTTTTTTG ATCCGTTCGT ACCGGATGTG GTCCAGGGAC AAGACAGGAT TGAACGCTGG GAGGACATTC CGACCGACGA ACTCGCCGCC AGCACGCGTT ACTGGGAACT GGCTCCCGGG CAGAAATGGC ATGGCTATGG GGCACTCGCC CCGGGCTACG TGATGACCGA CCCCAACAAG CTGACGCTGC TGACACCGGG CTTTAACCGC GAGACGGGTG AATACGCGGA GCATGGCATT CCGGCGGCGG TACTGGCCGA GTTTCTTCGG GAAGTGCGGA TCGTCCCGGA GAAGAATGAC CTGAACAGCA TCCTTTTCCT GCTGACGCCG GGGCTCGAAT CGTCGAAGGC CGGCACACTG CTGTCGGCAC TGGTTCGCTT CAAGCAGTTA CACGACGACA ACGCGTTGCT CGAGGACGTC ATTCCCTCAT TTGTGGCAGC GCATCGTGCG CGCTATGCAG GCGTCGGCTT GCGGCGGTTG TGTGCGCAGA TGCATGACTT TTATCGGGAG CGAAACGTCA GCCGCCTTCA GCGGGAACAG TTTCGCGCGG CGCATTTTCC TGAAGCAGCG ATGCCCCCGC AGCAAGCGAT GCATGAACTC GTGCGCAACA ACGTCGAGTT GTTGCCGATC GATCAGATCC GCGGCCGCAT CGCGGCCACC CTCGCATTGG TCTATCCACC CGGCATCGGG GTCATCGTAC CCGGTGAAAG ATATGACGAG CGGGCGTTGC CGATGCTGGA TTATTTCCGC ATGTTCGAGG ACGGCGGCAA CCGTTTTCCG GGTTTTGAAA ACGAGATTCA GGGCATTTAT CGGAAGACCG AAAGCGATGG AAGCATGCGA CTCTACACCT ACGTCGTGAC CGAATAA
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Protein sequence | MLYDQMFGFL FCCAMPLPPT LPSSRLQRIV DELGRLGYGT TITAETAEAS SAIRSDASVG CIVVEWSLTE PENEVEAFVR FVRERGLDVP VFILVERHLL QEIPVAVLGH VTGYIFIEED TPEFVARNLV SHLHSYADSL KTPFFGAMVD YAEQANQMWT CPGHNGGVFY QKSPIGRAFV KHLGEAVFRN DLDNSVIELG DLLVHEGPAL AAQKAAARIF GAERTYFVLN GTSTSNKIAL TALVAPGDLV LFDRNNHKAA HHGALLLGGG LPVYLPTVRN VHGMIGPIDF ETLDETRIRD SIRRNPLIKD PQAWQRKRPF RVAIIEQCTY DGTIYDVQML VEKLGPLCEY IMFDEAWAGF MKFHPLFKGH FAMGLEALGA DAPGIIAAQS THKQLAGFSQ ASQIHVKDAH LDGQRRQVSH RRFNEMFMQH SSTSPFYPLF ASLDVGAQMM RGRSGEVLWD DTIKLGIEMR KKIRALRREY EATETDVARQ WFFDPFVPDV VQGQDRIERW EDIPTDELAA STRYWELAPG QKWHGYGALA PGYVMTDPNK LTLLTPGFNR ETGEYAEHGI PAAVLAEFLR EVRIVPEKND LNSILFLLTP GLESSKAGTL LSALVRFKQL HDDNALLEDV IPSFVAAHRA RYAGVGLRRL CAQMHDFYRE RNVSRLQREQ FRAAHFPEAA MPPQQAMHEL VRNNVELLPI DQIRGRIAAT LALVYPPGIG VIVPGERYDE RALPMLDYFR MFEDGGNRFP GFENEIQGIY RKTESDGSMR LYTYVVTE
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