| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0667 |
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| Symbol | |
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| ID | 4010181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 698143 |
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| End bp | 699312 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637953295 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_555915 |
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| Protein GI | 91780708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0000990839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC GACTTGCAAT GTTTTCGACC GCGCTCGCCA TGGGTATCGC TGCGCCCGTG
TTCGCGCAGT CGAGCGTGGA GATCTACGGC ATCATCGACG AAGGCCCTGA ATACAGCAGC
AATGCGGGCG GCCATCCCCT CTACAGCATC ACCACGGCGG CGCAAGGCGG CAGCCGGCTC
GGGTTTCGTG GCACCGAGGA TCTGGGCGGC GGCCTGAAGG CGCTGTTCAG GCTGGAGAAC
GGCTACGACC TGGGCACCGG CAAGCTGGGG CAGGGCGGCC TGATGTTCGG CCGCCAGGCC
TATGTCGGCC TCGAAGCAAG CCATTACGGC ACGGTGACCC TGGGGCGTCA GTATGACGAT
ATCGTCGACT TCATCGGACC GTTGACGGTC GGCGATCAGT GGGGCGGCAC GATCGGCTCG
CATCCCGGCG ATCTCGACAA TTTCGACAAC AGTTTCCGCA CCAACAATTC GGTGAAGTAC
GCCAGTCCCA ACTACGGCGG CATCAGCTTC GGCGGCATGT ACAGCTTCGG CGGCATCGCC
GGCGATACCT CAGCGAACCG CGTATGGTCC ATGGGCGCAG GCTACACGGG CGGCCCACTG
CAACTGGGGC TGGGCTACCT GAATGTGCGC AACTCCAATG TGAGTTTCTT CGGCAACAGC
GGCGTGACCG CCACCACCAA CAATATCGCC AGCCCGGTGT ATAGCGGTTA TGCGTCCGCT
ACCACTTACG AGGTGTTCGG CGCGGGCGTC AACTACACTT TCGGTCCGGC TCTGGTCGGG
CTTCTCTATT CGAATATCCG CTTTCTGTCG CTCAACAATA CAGCGCAAAG CGGACCGAAT
CCGAATCATC TGGACGGCGA TGCCGCCTTC AACGACGTCG AAGTGAGCTT CAGATATCAC
CTCACTTCGG CTCTCCTGCT GGGCCTTGAA TACAACTACA CTCGGGGGAA TTCGATGAAC
GGTCAGGATC CCGCGCAATA TCATCAAGGG ACGCTGGGCC TGGATTATTT CCTCTCCAAA
CGCACGGACC TCTATGTAGT GGTGGCTTAC CAGAAGGCAT CCGGCGTCGA TTCGACTGGC
AAGGCTGCGG TGGCTTCGAT CAATACCGTC ACGCCTTCGA GCAGCGACCG GCAGACCATC
GTATCGCTCG GTTATCGACA CAAGTTCTGA
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| Protein sequence | MKIRLAMFST ALAMGIAAPV FAQSSVEIYG IIDEGPEYSS NAGGHPLYSI TTAAQGGSRL
GFRGTEDLGG GLKALFRLEN GYDLGTGKLG QGGLMFGRQA YVGLEASHYG TVTLGRQYDD
IVDFIGPLTV GDQWGGTIGS HPGDLDNFDN SFRTNNSVKY ASPNYGGISF GGMYSFGGIA
GDTSANRVWS MGAGYTGGPL QLGLGYLNVR NSNVSFFGNS GVTATTNNIA SPVYSGYASA
TTYEVFGAGV NYTFGPALVG LLYSNIRFLS LNNTAQSGPN PNHLDGDAAF NDVEVSFRYH
LTSALLLGLE YNYTRGNSMN GQDPAQYHQG TLGLDYFLSK RTDLYVVVAY QKASGVDSTG
KAAVASINTV TPSSSDRQTI VSLGYRHKF
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