Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0653 |
Symbol | |
ID | 4010167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 681606 |
End bp | 682910 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637953281 |
Product | carbohydrate-selective porin OprB |
Protein accession | YP_555901 |
Protein GI | 91780694 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.600231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.965177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATGTA TCGCCATGAC CGGTGCCGCG GCGGAAGAGG TAGCACCATC ACCGGTGGTG CAACCCGCAC CCGCCGCAGA AACGACAGAC TGCGCGCGAC TGGACGCGCT GAACACGCGC AGCCGGAGTG CAGAGGTTCA AATGCCGGTG TGTCAGACCA TGCTGTCAGA CATCGGTGGA TGGCGCACCT GGCTTGCGGA TCGTGGTATC GGTTTTCAGG CATCTGCTCT CGCAGGTGTC AACTACGACG TGCTAGGTCA TGCGCGAACC CCGCAACTTT ACGGCGGACA GAGTCCAACT TATAACACCT CGTCATACGC GCTGTTCACC TACGATCTTA CCCGGCTCGG AATGCCTGGC GATGCACAGC TCACAGTCAA GGCAGACTGG TACACAAACA GCTACTTCCC CTCCATACGT TATTCCGGCT TTACGGCCGT GGCGATAAAT CAAAGATTTC TGAATGGCGA TGTCGAATTA CAATACGGCT ACTTCGACCT GTCGCATAGT TTTTATGGGA CTGTCCTTGG TGGCAATCCC GCGGTTGCTT CTTTTGGGCC GCAAAGCAAT GTTCTCTATT CTGCAGGTAT AAGCTCGGAG TCACCGACGC CAGCGGCCCA GATCATTCTC CGGGATCCAG CAACCCAACA CTTCTATAAC AATTTCATTG TTTCCCGAAG CACTAGCCCC GACGGACAAC TGGTGGAAAA TCGGGCGAAT CCCGTTGGCC TGCGGTTTTC GATTCCCGGC GACGGAGCGC TTTTCGTCGA CGAAGTCGGG TACAAGAGGG ATGCATCTGT CAGTTCGCGG AGCCTTTGGG TACGCGGGGG TGCCGTGATC AACACGAGCG ACTACCCGGC GCTTGACAAG ACCAGATCAC AAACGTCTTC ACTTCACAAC AGGGCCTTTT ATGGAGCCGC GACCGCGCAA CTTACGTCAC CATACAGCGA CGCGCGCGGC CTGTATGTTG ATGCGAAAGT CGATTATTCT CCGAGCGACG TCGCACTGTT CGCGCATGAC TATAGTCTGA CCGCCTTCAT TCTTGGACCA TTCAGCACAC GCCGGAAAGA TATGGTTTCA CTATCGTGGT CCCAAAGCTT TTTCAGTCCG GAGGAACGCA GAACGCTGCA GGCCCGTGGC GCGGATTCCG CGCATTCCAC CAGTTCACTG GAGATTTCCT ACGCATTGAA TCTTGCCCGC GGCGTCTATC TGATAAGTTC CCTGACCAGG ACCTGGAATC CGGTATTTGC CCCGCTTCAG CCACCGGCCC TGTTTGTCAA TGAATCGGTG TCAGTGACGT TCTAA
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Protein sequence | MSCIAMTGAA AEEVAPSPVV QPAPAAETTD CARLDALNTR SRSAEVQMPV CQTMLSDIGG WRTWLADRGI GFQASALAGV NYDVLGHART PQLYGGQSPT YNTSSYALFT YDLTRLGMPG DAQLTVKADW YTNSYFPSIR YSGFTAVAIN QRFLNGDVEL QYGYFDLSHS FYGTVLGGNP AVASFGPQSN VLYSAGISSE SPTPAAQIIL RDPATQHFYN NFIVSRSTSP DGQLVENRAN PVGLRFSIPG DGALFVDEVG YKRDASVSSR SLWVRGGAVI NTSDYPALDK TRSQTSSLHN RAFYGAATAQ LTSPYSDARG LYVDAKVDYS PSDVALFAHD YSLTAFILGP FSTRRKDMVS LSWSQSFFSP EERRTLQARG ADSAHSTSSL EISYALNLAR GVYLISSLTR TWNPVFAPLQ PPALFVNESV SVTF
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