Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0620 |
Symbol | |
ID | 4010134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 644063 |
End bp | 644896 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637953248 |
Product | putative short-chain dehydrogenase/reductase |
Protein accession | YP_555868 |
Protein GI | 91780661 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.096892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC GTCTGAAGGA CCGTGTTGCG CTGGTGACCG GCGCGGCGAG CGGCATCGGC GCGGCCACCG CCCGCCTGAT GGCGCAGGAA GGCGCCTTCG TCGTGCTCGC CGACGTGGAC GAACACGCCG GGCAGGCGCT GGCGCGCGAA CTGCGCGACG CGACGTTCGC GTACACGGAT GTGAGCGTTG AGGCGCAGGT GGCGGCTGCG GTCGACGAGG CACTGCGGCT GCATGGCCGG CTCGATTGCA TGGTGAATAA CGCGGGCTTC GTCGGCGCAT ATGGCTCGAT TCTCGAAACG AGCGCGGCCG CGTGGCACGC GACGCTGGGC GTGCTGCTCG ATGGCGTGTT CTACGGAATC AAGCACGCGG CGCGCGCGAT GGTCAAGCAG GGAAGCGGCT GCATTCTCTC GGTGGCGAGT ACCGCGGGCG TGATGGGCGG GCTCGGTCCG CACGCGTACA CGAGCGCCAA GCACGCCGTC ATCGGATTGA CCCGCTCGGC GGCTTCGGAA CTTGCGCCGC GCGGCGTGCG CGTCAATGCC GTCGCGCCGG GCACGACGGT CACCGAAATG ATGGTGCAGG GCCGCGGCAG CAGGCAGGCC GCAATCGACG CGGCGACCCG GGCTTCGCCG CTCGGCACGC CGCTGATGCC GCAGGAGATC GCCGCGGCGC TCGTGTATCT CGCGAGCGAC GACGCGCGCC ATGTGAACGC CCACACGCTG GTGGTCGATT CGGGTGTCAC GGTGGCGGGT GCGTCGGGTG GCGCCGTGTT TCATAACCGG CCCGCGGGCT TCATGGGCCG CATGCCGGGC GGCGCGAACG CCGACGCCCG CTGA
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Protein sequence | MSERLKDRVA LVTGAASGIG AATARLMAQE GAFVVLADVD EHAGQALARE LRDATFAYTD VSVEAQVAAA VDEALRLHGR LDCMVNNAGF VGAYGSILET SAAAWHATLG VLLDGVFYGI KHAARAMVKQ GSGCILSVAS TAGVMGGLGP HAYTSAKHAV IGLTRSAASE LAPRGVRVNA VAPGTTVTEM MVQGRGSRQA AIDAATRASP LGTPLMPQEI AAALVYLASD DARHVNAHTL VVDSGVTVAG ASGGAVFHNR PAGFMGRMPG GANADAR
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