Gene Bxe_C0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0514 
Symbol 
ID4010028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp528575 
End bp529777 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID637953145 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_555765 
Protein GI91780558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACG GGATCAGGAA TGCTATCGCC GCATTGATGC TGGGCGTGAC GTTTCCCTGC 
ATGGCCCAAA TCTCGGAAAA TGTCATCAGA ATAGGGGTGC TTACCGATCT ATCGGGACCC
TACATGGACG TAGATGGTCC GGGAGGAGTC GAGGCTATCC GCATGGCCAT CGCCGATGCT
GGCGGCACCA TTGACGGCAG AAGGATCGAA CTTCTGGTTG CGGACCATCA GAACAGGACG
GATCTCGCCG TCTCAAAGGC CCGCGAATGG ATCGACACGC GTGGCGTTGA CGTCATCTTC
GCGGGTGGTG CGTCGGCAGC CGTGCTTGGG ATGGCACAGG TCGCCAAGGA AAAGAAAAAG
CCGCTGATAG TGAACGGCGC CGGCAGTGCG AGACTAACAA ATGAGGACTG CTCGCCGTAC
ACCGTGCACT ATGCTTATGA CACAGTTGCA TTAGCAAAAG TCGGCGGTGC CGCGCTTGTT
AGGCAAGGCC TGAAGTCCTG GTTTTTTGTT GCGCTTGATA CGGCGTTCGG CGCATCCACA
GTTAGCGACA CCTCCGAAGT ACTGCGGGCC AACGGCGGAA AAGTCATCGG AGTAGTCAGG
CATCCTGTGA ACCTCCCTGA CTTTTCGTCG ATCATGCTTC AGGCCCAAGG TTCTGGGGCG
CAGGTTCTGG CTCTGGCGAA CGCCGGCTCC GATGCGGTGA ACGCAATCAA GAGCGCAAAG
GAATTCGGCG TTATGCGGAG CATGAAGGTG GCGGGGCTAA ACCTGTTCAT TGGGGACGTG
TACTCCTTCG GCCTCCCTAC GGCCCAAGGC TTGTACCTGA CGGAAAACTG GTACTGGGAC
ATCTCGCCAG AGTCCCGTGC CTGGTCAAAA CGCTTCTTCG AGAAGATGAA AAAGATGCCG
GCTGGCACCC AGGCCGCGCA GTACTCCGCA GCTTCTCACT ATCTTGCCGC TGTGAAGGAA
ACAAGGTCGG ATGATGGCGA CAAGGTGATG GCAGCCATGA AGTCGATGCC GATCAACGAC
ATGTACGCAA AAAACGGAAG GATTCGCGCG GACGGCAGGA TGATCCACGA GATGTATCTC
ATGCAGGTTA AGACGCCAGC GGAGTCTCAT TACCCGTGGG ATTACTACAG GATCGCGGAG
CGCGTGCCCG CGGAGGAAGC GTTCACCACG AAGGCACAGT CGAAGTGCCC TCTGTGGAAA
TAG
 
Protein sequence
MIYGIRNAIA ALMLGVTFPC MAQISENVIR IGVLTDLSGP YMDVDGPGGV EAIRMAIADA 
GGTIDGRRIE LLVADHQNRT DLAVSKAREW IDTRGVDVIF AGGASAAVLG MAQVAKEKKK
PLIVNGAGSA RLTNEDCSPY TVHYAYDTVA LAKVGGAALV RQGLKSWFFV ALDTAFGAST
VSDTSEVLRA NGGKVIGVVR HPVNLPDFSS IMLQAQGSGA QVLALANAGS DAVNAIKSAK
EFGVMRSMKV AGLNLFIGDV YSFGLPTAQG LYLTENWYWD ISPESRAWSK RFFEKMKKMP
AGTQAAQYSA ASHYLAAVKE TRSDDGDKVM AAMKSMPIND MYAKNGRIRA DGRMIHEMYL
MQVKTPAESH YPWDYYRIAE RVPAEEAFTT KAQSKCPLWK