Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0455 |
Symbol | |
ID | 4009969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 475014 |
End bp | 476222 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637953089 |
Product | putative type IV secretion system protein VirB10 |
Protein accession | YP_555709 |
Protein GI | 91780502 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAG AAACGTCGCG CAATGTTATT GCGCCTGACA CTGACCCGGC GAAGGTCACC GATACCATAA ACGGTGACCT CCCGAACCAG CCGATCGATC GCGGCATGCC GGAACTGGGG CAGCAGGGTG GCCGAGCCCG TGCCTGGTGG CTTGCGCCGC TGGTCATCGT GGCTCTCGTG ATCGGTGGAG CGGCCTGGAC GATCCACGGG TTTCTCGTGC GGCACGATGC GGCGGAGAAG GCCAGGCGCG ATGCGGTGCA GGATCAGCCG TCCCAGGGAC GGGTGTTCGG CGACGGGAAC CCACCGGCAT CGGCTGCTGC TGCCGCTGCC GCAAGCAGCC CGGCGGGAGC AGCCACCGTT GCGTCGGCTC CCGCTGCGGT GTCGACGCGG CAGGTACCTG TGCACACTGC ACCAGCTCGC AGCTACTACG ACGCACCGCT ACTCGCCACC GGAGGTGCGG GCGCTGGCAA TGGCCCCGCC GACGAACGGG CAGACCCGGC GGTATCAGCG GCAGGCGTTT CGCCAGGAGC GACTGTCGTA TCCGGCAGCC AGTCTCAGGG AAGCGGTCCT TTGGCCCGGG CATTGACGCC GACGGTGACG CCCAAAGTGC GCGCGGGGTT TCTCGGCAAT CGCAGCATGA TCCTCGCGGA AGGCGCCAAG ATCGACTGCG CCGGCGATAC GGCATTTGAT TCGACCCAGG CGGGTATCTC GACCTGCACG GTGACGAAGA ACGTCTATTC GGATGACGGC CGTGTCGTGC TGATCGAGCG CGGCTCGCAG ATCAACAGCG AGTACCGCTC GAACCTGGCG CCCGGACAGA AGCGGGTGTT CATCCTGTCG GCACGCATCA GGACCCCCGA GGGTGTGACG GTCGAGATCG ATTCTCCCGC GGCGGATGCG CTGGGGCGCA TCGGGGTGAG CGGATACGTG AACAACCATT GGGGCGAGCG TATCGGCGCG GCCATGCTGC TTGGCATGAC GCAGGACGCG ATCGGGTATC TCGCGACGCG TGGCGGCAAC AGCAACGGCT CGGTCGTATT CGAGAACACG CAGCAGCAGG GCAACGACAT GGCCTCGCGC GTGCTCGACA GCACGATCAA CATTCCGCCC ACCCTGACAC AGAACCAGGG GGCCGAGTTC ACGATTATCG TTGCCCGGGA TCTGGACTTC AGTCCGGTCT ACGCGCTGGA GCCGGGGGGT ACGCGATGA
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Protein sequence | MNEETSRNVI APDTDPAKVT DTINGDLPNQ PIDRGMPELG QQGGRARAWW LAPLVIVALV IGGAAWTIHG FLVRHDAAEK ARRDAVQDQP SQGRVFGDGN PPASAAAAAA ASSPAGAATV ASAPAAVSTR QVPVHTAPAR SYYDAPLLAT GGAGAGNGPA DERADPAVSA AGVSPGATVV SGSQSQGSGP LARALTPTVT PKVRAGFLGN RSMILAEGAK IDCAGDTAFD STQAGISTCT VTKNVYSDDG RVVLIERGSQ INSEYRSNLA PGQKRVFILS ARIRTPEGVT VEIDSPAADA LGRIGVSGYV NNHWGERIGA AMLLGMTQDA IGYLATRGGN SNGSVVFENT QQQGNDMASR VLDSTINIPP TLTQNQGAEF TIIVARDLDF SPVYALEPGG TR
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