Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0453 |
Symbol | |
ID | 4009967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 473442 |
End bp | 474188 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637953087 |
Product | putative type IV secretion system protein VirB8/TraJ |
Protein accession | YP_555707 |
Protein GI | 91780500 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTG AGCGTGACGC CCGCGAATCA CGTGATTATC GCCGGGCACT CGATTTCGAG GTGTCGGTCG CGCACCTGCA GGAGCGCTCG GAGCGTCGGG CATGGCACGT GGCTATGGGC TCCGTGGTGG TCGCGATCCT GTGTGCTGTC GCACTGGCCG TGATGGTCCC GTTCTATCGG GTGGTGCCGC TGCCGATCGA GGTCGACCGT CTGACCGGTG AAGCACAGGT GATCGACGTG CTCGACGCGA AGCAGACGCA CATGCGGGAT ATCGAGGACA AGCACTGGGT GGAAGCGTAC GTGCGCTCGC GTGAGCGCTA CGACTGGGGC CTGCTGCAGA TGGACTACGA CCGCGTGCTC GACATGAGCG ACGACCGTGT CGCGCGGGAC TACCGGTCGA TCTACAGCGG CCCGGATGCA CTGGACCGGC AGCTCGGGGC GAACACACAG CGGCGTATCC GCATCCTCTC GACGACGCTC GTGCCCGACG AACCCGGCCG TGCTGTCGTG CATATCGAAC GCACGACGCG GAAGAACGGC ATCGATAACG CGGAGCCCCC GCAGCGCTTC GTCGTCACGC TCGCCTTCAC ATACCGGCCG TCCGTCTTCA CGCGTGAGCG CACGGCCATC GAGAATCCCT TCGGCTTCAG GGTGACGGCG TATAGCCGCG ATCCCGAATA CACCCCCACG GCGGTGTCGC CCGCGTCGTC GCCGACATTG TCACCTGCTC CGGGAGGTGC GCCATGA
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Protein sequence | MSSERDARES RDYRRALDFE VSVAHLQERS ERRAWHVAMG SVVVAILCAV ALAVMVPFYR VVPLPIEVDR LTGEAQVIDV LDAKQTHMRD IEDKHWVEAY VRSRERYDWG LLQMDYDRVL DMSDDRVARD YRSIYSGPDA LDRQLGANTQ RRIRILSTTL VPDEPGRAVV HIERTTRKNG IDNAEPPQRF VVTLAFTYRP SVFTRERTAI ENPFGFRVTA YSRDPEYTPT AVSPASSPTL SPAPGGAP
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