| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0272 |
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| Symbol | |
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| ID | 4009643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 294355 |
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| End bp | 295521 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637952925 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_555545 |
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| Protein GI | 91780338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000181178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA TTGTCTGTCT TTCGGTTTTT GCCGCTGCCG TGTTTGGCGC ACCTTCTGCT
TACGCACAGA ATTCCGTGAC ACTTTACGGC GTTATTGATG TGGGCATTAA CTGGCAAAGC
AATGCGGGCG GCAAGCATCT GTTCAGCATG GTTGATGGCA TGGCCGGCGC GAACCGGTTC
GGGTTAAGAG GGACCGAGGA TCTTGGGGGA GGATGGAAGA CGGTCTTTGT GCTTGAAAAC
GGATTTTATG CCATTAATGG CGCCACCCAG TTCACAGGCA TGTTTGGTCG CCAGGCGTAC
GTCGGTTTGA GTAACGCCCA GTACGGGATG TTGACGCTGG GCCGGCAGTA CGATTCGCTG
GTAGATACGC TGCAGCAGTA TTCGATCGTC GTAAAACTTG GCGGCGCAAT GTTCTTTCAT
CCTGGGGACG TTGACAATAT CGGCGATTCA CACCGGGTGA ACAATGCGAT CAAATATACC
TTCAAACGGG GGCCGCTTAC TGCCACTGCG CTATATAGCA TGGGCGGTGT AGCGGGGCAG
TCCGGGCGGA ATCAGATCTG GTCCGCAGGC GTGAATTATG CGGGCCCGTC GTTTTCGCTG
GGAGCCGCGT ACCTCGATGT CAGAAATCCG AATGTATCGT TTTTTCCAGT GAATAATGTT
GGAGCGAGTG CCTCACTCGA CAATATAGGT CCGAAGCCAG TGTTTTCTGG CTATGCTTCG
GCCGCGACTT ATCGTGTCAT TGGACTGGGC GGCCATTACG TGTTCGATCC GGTGACATTC
GGCATCGTTT ACACGAATGT CCGGTTCGGT GGACTGGGCG ACACCAGTTC GGGCCCCAAT
CCTCTGGGCT ATACAGGAAG TGCGATATTC AATGGGGTAG AGGTGAGCGC CGATTACCGC
CTATCGCGTT CGTTGTCAGC GGGCGTGGCG TACGATTACA CGCGCAATAA CGGCGCGTCC
GGAAAAGGCG CCGCTACCTA CAATTCGGTA ATGGGCGGGG TAGATTATTC GCTATCGAAA
AGAACGGATG TTTATCTCGT CGGAATATGG CAGTCGATGA CAGGGGTGGA TTCGGCAGGG
GGGAGTGAGG CGCAGGCCTC GTTGTTTTCA CCATCGTCGA ATGGTCGGGA GGCGATCATC
AGAGTCGCAA TGTGCCATCG ATTCTGA
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| Protein sequence | MRKIVCLSVF AAAVFGAPSA YAQNSVTLYG VIDVGINWQS NAGGKHLFSM VDGMAGANRF
GLRGTEDLGG GWKTVFVLEN GFYAINGATQ FTGMFGRQAY VGLSNAQYGM LTLGRQYDSL
VDTLQQYSIV VKLGGAMFFH PGDVDNIGDS HRVNNAIKYT FKRGPLTATA LYSMGGVAGQ
SGRNQIWSAG VNYAGPSFSL GAAYLDVRNP NVSFFPVNNV GASASLDNIG PKPVFSGYAS
AATYRVIGLG GHYVFDPVTF GIVYTNVRFG GLGDTSSGPN PLGYTGSAIF NGVEVSADYR
LSRSLSAGVA YDYTRNNGAS GKGAATYNSV MGGVDYSLSK RTDVYLVGIW QSMTGVDSAG
GSEAQASLFS PSSNGREAII RVAMCHRF
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