| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0270 |
|---|
| Symbol | |
|---|
| ID | 4009641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 291651 |
|---|
| End bp | 293084 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637952923 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_555543 |
|---|
| Protein GI | 91780336 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0250869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGA CTCGTCGAAG TGCCGCAATG CGGCTGGATC GTCTACCGAT CGGTCGATTC
CATTGGCGGT TGCTGGGATT AATCGGTGGC GGCCTGTTTC TCGACGGATT CGAAGTGTAC
GTCGCCGGCG GTGTAGTCGG ATTTCTCGTC AAGACGGGCT GGGCGAACAT GCACTCTGCG
GCGATGTTCG TGTCGGCCAG TGTGGCTGGG ATGGCGCTCG GCACGTGGCT CGCAGGGGTA
TTAGGCGACC GCTTTGGCCG TCGGTTTACG TATCAGTTCA ATCTGCTGCT GTTTGGTCTG
GCGTCATTTG CAGCCGCGGT CGTTTCGTCG ATGGATCAGT TGATTGTCGC CCGCTTCGTC
ATGGGGATAG GCTTGGGTGC GGAAGTCGTC GTGAGCTATG GCACCCTGGT CGAATATATA
CCACCGGCTC ACCGGGGCAG ATGGTCCAGC GGCCTGTCGC TATGCGGTAA TGCGGCGCTA
TTCGTAGCCG CGCTGGTGGG TTATTTCGTC ATACCGGACC TTGGCTGGCG GTGGCTGTTC
GGTGGAGTCG GCGTTGCCGC CCTGATCATC TGGTACATGC GCAAGGCAGT TCCCGAGTCC
CCGAGATGGC TCGAATCCCA GGGACGATTC GAAGAAGCAG ACCGTATCCT GGACGACATT
GAACAGGAAC TCGCGTACGT CGGACAGCCG GGAGAAGCCG CTGTTCCCGC CTATGCAGTG
GTGCCGGACC TGCCCCGACG CATGCTGGTT CCGCGGTTTA TCATCGGCAT TATGATGAGT
GTGGCGGGTA ACGCGGCATT CTACGGATTG ATTGTCTGGC TACCGACCTT CTTCTTCAGG
CAGGGATTTA CGGTTGGAAG CTCGCTCGGA TATTCGATGG TCATGTCCGC CGGAGGTCCT
GCAGGTGCGC TGGTTGGCAT GGCTATCGCC GATCGTGTCC GCCGCAAGCG TGCAATCATC
GTTCTGTCGA TCGTGGCTGC ATTGCTTGGT CTTGTCTATC CGCTCTGCAA GACCCCGTTG
AGCGTTCTGG TTACCGGCTT TCTGCTTGTG AGCGCGCTGT ATGCGTTCGT CGCCGTGGCG
TGGGCGTCAT ACCTGCCGGA GCTTTTTCCT ACAAGAATCC GGCTGCGTGC CTCGGCCGTA
TGCAACGTGA CCGGACGGCT TGCAGCGATC GCCATGCCAT TCGCGGTCGT CCAGCTTTAC
GCGAAATTCG GTGTGTTTGG CGTGGTGGGC GCATTGGGGG GGATCCTGCT TGCCCAGGCT
GCGGTGATTG CGTTGCTGGG CATCGACACC AACAACGTCT CTCTTGAGGA ACTAACCGGC
CAGTCCGCTG AAGAGATCGG TCCAGCCGCG AATCAACGCT TCCCGTCATC TCGGGACGGC
AGGCTGGGGA GTCGCTCGTC GCAGTTCGGT ATGAGCGGAA TTGAAGATCA GTAA
|
|---|
| Protein sequence | MLETRRSAAM RLDRLPIGRF HWRLLGLIGG GLFLDGFEVY VAGGVVGFLV KTGWANMHSA
AMFVSASVAG MALGTWLAGV LGDRFGRRFT YQFNLLLFGL ASFAAAVVSS MDQLIVARFV
MGIGLGAEVV VSYGTLVEYI PPAHRGRWSS GLSLCGNAAL FVAALVGYFV IPDLGWRWLF
GGVGVAALII WYMRKAVPES PRWLESQGRF EEADRILDDI EQELAYVGQP GEAAVPAYAV
VPDLPRRMLV PRFIIGIMMS VAGNAAFYGL IVWLPTFFFR QGFTVGSSLG YSMVMSAGGP
AGALVGMAIA DRVRRKRAII VLSIVAALLG LVYPLCKTPL SVLVTGFLLV SALYAFVAVA
WASYLPELFP TRIRLRASAV CNVTGRLAAI AMPFAVVQLY AKFGVFGVVG ALGGILLAQA
AVIALLGIDT NNVSLEELTG QSAEEIGPAA NQRFPSSRDG RLGSRSSQFG MSGIEDQ
|
|---|
| |