Gene Bxe_C0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0180 
Symbol 
ID4009728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp199792 
End bp200619 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID637952835 
Productputative acyl transferase 
Protein accessionYP_555455 
Protein GI91780248 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.728763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGGCCG ATCACAACGC GTTCAGACGG GCCCTGACCG AGCGATGGGG CAAGGCTTTC 
GGGGAGCCGG TGATACATGA GGACCCGCGC ACGCGTTCGC TGTGTTTCGG CGCTCCCGGC
GTACAAAGCT CGATGCGCAC GAGTGATCCG CTGGAACTCG ATCTGCCGTA CACGCGGGCC
ATGATGTCGT TCCAGCTCTT TTGCCCCGAT CCCAAAGACA TTCTGATCGT GGGTCTGGGC
GGAGGATCGC TGTCGAAATA CTGCTTTCAC AAGTTTCCGT CCGCACGGGT AACCACGGTG
GAAATCGACG AGCGCGTGAT CGCGTTGCGC GACGCGTTTT TTATTCCGCC CGAGTCCGAA
CGATTCCGGA TCGTGCACGC CGACGCGGCG GCATATCTCC CGGACAAGGT TGGCCTCGCG
GATGTCATCC TGCTGGACGG ATTCGACGCG TCCGGACTGC CGGCCAGCCT GTCGAGCCAG
TACTTTTACG ATTGCTGCCA TGCCGCGTTG CGCGACGAAG GCGTGCTGGT GGCCAACCTG
CTGAGCAGCG ACCCGCGACT CGGCGCCCAT CTCGACCGGA TACACCGCGC ATGCCACGGA
AAACTGTTCC GTACCATGGC GCGCCGCGAA GGCAACACGA TCGCCATCGG AATCAGGCAG
GCAACCTGGC CGGGCTGGCC CGACCTGTAC GCCCGCGCGG AAGCCATCAC GGCGTCGACA
GGTCTCGACC TTTGCCGGTA TGTCAAAAAA ATGGAACGTC ACCACCGGGT AGAACCGGTT
TCTGAACACC CTTCATCCGA CACGCTGGCC GTTGAGCAAA ACCGCTGA
 
Protein sequence
MSADHNAFRR ALTERWGKAF GEPVIHEDPR TRSLCFGAPG VQSSMRTSDP LELDLPYTRA 
MMSFQLFCPD PKDILIVGLG GGSLSKYCFH KFPSARVTTV EIDERVIALR DAFFIPPESE
RFRIVHADAA AYLPDKVGLA DVILLDGFDA SGLPASLSSQ YFYDCCHAAL RDEGVLVANL
LSSDPRLGAH LDRIHRACHG KLFRTMARRE GNTIAIGIRQ ATWPGWPDLY ARAEAITAST
GLDLCRYVKK MERHHRVEPV SEHPSSDTLA VEQNR