Gene Bxe_C0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0159 
Symbol 
ID4009707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp172810 
End bp173814 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content65% 
IMG OID637952814 
ProductABC aliphatic sulphonates transporter, periplasmic ligand binding protein 
Protein accessionYP_555434 
Protein GI91780227 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTAA TGACGCGGCG CGCTTTTACG CGCGCCATGC TGGCTGCCGC ACTGACCATC 
ACCGGCACGC AGGGCCATGC CCAGGCATCG CGAACGGCCG GGTCTCCCGT CGCCTTGCGT
ATCGGCTACC AGAAATCGTC GACGCTAATC ACGCTGCTCA AGGCGCGCGG CTCGCTGGAA
CAGGCGCTCG CGCCGCTCGG CGTGAACGTC TCGTGGCACG AATTCGCAAG TGGCCTGCCG
CTTACCGAAG CGCTTAACGT CGATGCGGTC GACTTCAGCG CCGACGTCGC GGATACGGTG
CCGGTCTTCG CCCAGGCCGC GCATGCGAAC TTCGTCTATA TCGCGCAGGA AGCGCCGTCG
CCGGGCGCTC AGGCAATCAT CGTAAGAAAA GACGGTCCGC TGCACACGCT GGCCGACCTG
AAAGGCAAGC ACATCGCGGT AACGAAGGCG GCGGGAAGCC ACTATCTGTT GCTCGCCGCG
CTCGCCAAAG CCGGCCTTTC TCCGGCAGAC GTGACGATCC ACTACCTCGC GCCGGCGGAC
GGGCGGGCGG CGTTCGAGCA TGGCAGCGTC GACGCCTGGA TCACATGGGA TCCGTATGTC
GCTTCGGTCG ACAGAGACAC CAGCGTGCGC ATTCTCGCGG ACGGCAACGG ACTCGCGTCG
TATCAGCGTT ACTACCTCGC TTCGAGCAAT TTCGCCGCGG CGCACCCCGC AGTCATTCAG
ATCCTGTTCG ACCAGTTGTC TCAGGCGGGC ACGTGGCTGC GCACGCATCC CGAGGATGCC
GCGAAAACGC TCTCGCCGAT CTGGGGACTC GATACCACGA CAATCGAGCG GGCGAATGCG
CGCCGCAGTT ATGTGGTGCG ACCCGTCGTC CCGCAGAATT TCAGCGAACA GCAGAAGATC
GCCGATACGT TCCTGCAGGC CGGCCTGCTG CCGGCACGCG TGGATACGGG CGAAGCACAG
CGATGGGATT TCGCCACGAA GCGCGCGGAA CCCGCCGGGA GCTGA
 
Protein sequence
MTLMTRRAFT RAMLAAALTI TGTQGHAQAS RTAGSPVALR IGYQKSSTLI TLLKARGSLE 
QALAPLGVNV SWHEFASGLP LTEALNVDAV DFSADVADTV PVFAQAAHAN FVYIAQEAPS
PGAQAIIVRK DGPLHTLADL KGKHIAVTKA AGSHYLLLAA LAKAGLSPAD VTIHYLAPAD
GRAAFEHGSV DAWITWDPYV ASVDRDTSVR ILADGNGLAS YQRYYLASSN FAAAHPAVIQ
ILFDQLSQAG TWLRTHPEDA AKTLSPIWGL DTTTIERANA RRSYVVRPVV PQNFSEQQKI
ADTFLQAGLL PARVDTGEAQ RWDFATKRAE PAGS