| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0140 |
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| Symbol | |
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| ID | 4009805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 152478 |
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| End bp | 154082 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952795 |
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| Product | peptide/opine/nickel ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_555415 |
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| Protein GI | 91780208 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.259377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.633025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAC TGAATCGACG CGACTTTCTG ATCTCATCGG GCGCGGCGCT CGCCGCGGCC
AGCATGCCCT CATTGGCGTT CGCACAGGGC GAGGCCACCG CGCCGAAGCG AGGCGGCACC
TTGAACATGC TGATCAACCC GGAGCCACCG GTGCTCGTGT CGATCTTCCA GACGACGGGC
CCCGCACTCG TCGCGAGTTC GAAAGTGCTC GAGGGCTTGC TGGCCTATGA TTTCGATCTG
CGGCCGAAGC CGCAATTGGC CACCGCATGG ACGGTTAGCG CGGACGGCCT GAAATATGCC
TTTACGCTGC GTCAGAACGT CAAATGGCAT GACGGCGAGC CGTTCACGTC GGCGGACGTC
GCGTTTTCGA TCGATCTGCT CAAAGCGGTG CATCCCCGCG GTCGCAGCAC GTTCGCCAAC
GTGACGCGCG TCACCACGCC CGATGCGCGC ACCGCGGTCA TCGAACTGTC GAAGCCTGCG
CCATACCTGT TGAAGGCTTT GTCCGCGGGC GAATCGCCGA TCGTGCCGAA GCACCTGTAC
GCATCCGGCG ATCCGCTGAC GAACCCGCAC AACAACGCGC CGATCGGCAC GGGTCCGTAT
CGTTTCAAGG CATGGACGCG CGGCGCCAAT ATCGTCTATG AACGCAATCC GGACTACTGG
GACGCCGGCA AGCCGTATAT CGACGGCCTG GTATTCAAGG TGATCCCCGA CGCGGCCGCC
CGCTCGGCGG CCTTCGAAAC CGGCGCACTC GATCTGGGCG GCGAAAATCC GGTACCGTTG
ACGGACCTGC CGCGTCTCAC GCAATTGCCG CAACTGGCGG TGGAAACGCG CGGCTACCGC
TTTCTCGAGC CTTTGTCCGA GATCGACTTC AACCTGGATC ACCCGATCCT CAAGGATTTG
CGGGTGCGCC AGGCGATTGC TCATGCGATC AATCCGCAAG TCGTGCAGCG CACGATTGCA
TACGGTTATG CGGACCTGTC GCCTACGCCC ATCACGCCGG GTTCGCCGTA TCACGATGCG
AAGATCACCG CTTATGCGTT CGATATCGCC GGTGCGGAAA AGCTGCTCGA CGCGGCCGGT
TATCCGCGCA AGGATGGCGG CATGCGCTTC GGACTGACGC ACGATTTCCT GCCTTACGGC
GACCTGTATC GCCGCCAGGC CGACTACGTG AAGTCGGCGC TGGCGCGTGT GGGCATCGAC
GTGACGGTGC GTTCGCAAGA CCTGCCGGCG TTTCTGAAGC GCGTCTACGC GGACCGCCAG
TTCGACTTCA CGAGCATCGG CGTGAACACG CTGTTCGATC CGAGCGTCGG GGTCCAGCGT
CTCTACTGGT CGAAGAACAT TCGCCCGGGC GTGCCATTTT CGAATGCGCC GCACTACAGC
AATGCCGAGG TCGACCGCCT GCTCGAAAGC GCTTCCGTTG AAACCGACGA AAGCAGGCGC
GTCGCGCTGT ACCAGCAATT TCAGCAGATC GTTTATCGCG ATCTGCCGAT TCTCAACCTC
GTCGCGCCGC GCATGATCAC GCTGGCGAAC CGGCGCGTGC ACAACCACAC CGTATCCGCG
CAAGGCCTCG AAGGCAATCT CGCGGATGTC TATCTGAGCG CGTGA
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| Protein sequence | MAGLNRRDFL ISSGAALAAA SMPSLAFAQG EATAPKRGGT LNMLINPEPP VLVSIFQTTG
PALVASSKVL EGLLAYDFDL RPKPQLATAW TVSADGLKYA FTLRQNVKWH DGEPFTSADV
AFSIDLLKAV HPRGRSTFAN VTRVTTPDAR TAVIELSKPA PYLLKALSAG ESPIVPKHLY
ASGDPLTNPH NNAPIGTGPY RFKAWTRGAN IVYERNPDYW DAGKPYIDGL VFKVIPDAAA
RSAAFETGAL DLGGENPVPL TDLPRLTQLP QLAVETRGYR FLEPLSEIDF NLDHPILKDL
RVRQAIAHAI NPQVVQRTIA YGYADLSPTP ITPGSPYHDA KITAYAFDIA GAEKLLDAAG
YPRKDGGMRF GLTHDFLPYG DLYRRQADYV KSALARVGID VTVRSQDLPA FLKRVYADRQ
FDFTSIGVNT LFDPSVGVQR LYWSKNIRPG VPFSNAPHYS NAEVDRLLES ASVETDESRR
VALYQQFQQI VYRDLPILNL VAPRMITLAN RRVHNHTVSA QGLEGNLADV YLSA
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