Gene Bxe_C0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0117 
Symbol 
ID4009782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp130911 
End bp131954 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content64% 
IMG OID637952772 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_555392 
Protein GI91780185 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT ACAATGAATT TCCGCTGAGC CCGGCGCGCC GCGCATGGCT GCGCAAGACC 
GCCTGGAGCG CGGGTGCCGC CGCGCTGGGC GGCGCGGTGC TGAGCCTGCC GGGCTCGCTC
GCGCTGGCGC AAACGCCGTC CGCGCCGCTC AAGCCGCTCA AGCTCTCATG GAATGCGGGC
GCGATCTGTA CCGCGCCTGT AGCGGTCGCG GTGAAGCAGG GCTTTTTCGC GCGGCACGGT
TTGCAGGTCG AACTCGTGAA TTTCTCGGGC TCGACCGATC AGTTGCTCGA AGCCATCGCG
ACGGGCAAAT CCGACGCGGG CGTCGGCATG GCATTACGCT GGATCAAGCC GCTGGAACAA
GGTTTCGATG TGAAACTGAC CGCCGGCATC CATGGCGGCT GCATGCGCTT GCTGGCCACG
CGCGCGTCGG GCATCGTCGA CGTGGCGGGA CTGAAGGGCC GCACGATCGG CGTCAGCGAT
ATGGCCAGCC CGACCAAGAA CTTTTTCGCC ATCGTGCTGA AGAAGATCGG CGTCGATCCC
GAGCGTGACG TGAGCTGGCG CCAGTATCCG GCGAACCTGC TGGGCGAGGC GCTGAAAAAG
GGCGAAGTGC AGGCCATCGC CGACGGCGAC CCGACCATCT GGTCGATCCG CGAATCGGAT
CATTTGTATG AGGTCTCGAA TAACCTGTGC GGCGAATACC AGACGCGCTC CTGCTGCGTG
CTCGGCGTGC GCGGGTCGCT GGTGCGGAAG GATCGTGCGA CCGCACAGCA GTTGACCCAG
GCGCTGCTCG AAGCGACCGA GTGGACCGCC AATCATCCGG CGGAAGCCGC CGCGATTTTC
TCGGCTTATA CGCCGTCCGC CGACGTGGGC CAACTGACTG CGATGCTCAA GACCCACACC
GACCACCATC ACCCCGTTGG CGACGCGTTT AAAAAGGAAA TCTCGCTGTA TGCCGACGAC
CTGAAGACGG TCGGCGTGCT CAATAGCGGA ACCGATTCGA ACCGGCTGGC GGACCGGGTG
TTCTCGAACG TGCTGACTGC GTGA
 
Protein sequence
MNPYNEFPLS PARRAWLRKT AWSAGAAALG GAVLSLPGSL ALAQTPSAPL KPLKLSWNAG 
AICTAPVAVA VKQGFFARHG LQVELVNFSG STDQLLEAIA TGKSDAGVGM ALRWIKPLEQ
GFDVKLTAGI HGGCMRLLAT RASGIVDVAG LKGRTIGVSD MASPTKNFFA IVLKKIGVDP
ERDVSWRQYP ANLLGEALKK GEVQAIADGD PTIWSIRESD HLYEVSNNLC GEYQTRSCCV
LGVRGSLVRK DRATAQQLTQ ALLEATEWTA NHPAEAAAIF SAYTPSADVG QLTAMLKTHT
DHHHPVGDAF KKEISLYADD LKTVGVLNSG TDSNRLADRV FSNVLTA