| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0096 |
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| Symbol | |
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| ID | 4009761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 108268 |
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| End bp | 110091 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637952752 |
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| Product | branched chain amino acid ABC transporter inner membrane protein |
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| Protein accession | YP_555372 |
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| Protein GI | 91780165 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.26664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT GGTTCGACTA CACGATCAAC GGCTTGATCG TCGGCAATAT CTATGCGCTG
CTGGCGGTGG GACTCGCTCT CATTTTCGGC GTGTCGCATC TGATCAACTT CGCGCATGGT
TCGGTGTACA TGGTCGGCGG CTTTATCGGC TGGCTATGCC TGACCCGGCT CGGCTTGCCG
CTGCCGGTCG CGTTGCTCGC GACGGTGGCA GGCTGTGCGT TGCTCGGCAT GCTGATCGAA
CGGATCGGCT TGCGGCCGCT GCAAGGGGCG GCGCGCATCG CGCCGTTGCT GGCGACGATC
GGCATCAGCT TCGTGCTCGA TCAACTCGCG CAAATCGTTT TCGGGCCGGA CCCGCGTCCG
GTGCCGAGCA CGTTGCCGGA GTGGTCGTTC ACGATTGGCG GCGCGACGCT CGGCTCGCTC
GATCTGCTGA TCGCGGCGAC CGGCATCGGC GCGGCGGCTG TGCTGTATGT GTTTCTGCGC
TTCACGCGGC TCGGCTGGGC GGTGCGCGCC ACCGCGCAGG ACCGCGATGC CGCGCTGCAG
ATGGGCGTCA ACGTGCACGC GGTGAACCGC GCGGTATTCG CCATTGCCTG CGGGCTGGGC
GGTCTGAGCG GTCTGCTGGT CGGCATGTAC TACAACAGCA TCGATCCCGC GATGGGTTTC
CAGGCGACGC TCAAGGGCGT GGTCGCCTTG CTGATCGGCG GTCTCGGCAA CGTGCCGGGC
GCAATCGCCG GCAGCCTGCT GCTGGGGCTC GTCGAGAGCT ACGGGGTGGC GCTGTTCGGC
ACGAGCTACC GTGACCTGTT CGCGTTCGTA CTGCTGTTGC TGTTTCTCGT GTGGCGGCCA
AACGGACTGT TCAGTGCGAA CCGGCGCCTG CCGCCCGAAC CGCTGACGGG CACCTTCCTG
TCGTACGGTC GTGCGCTGCG TGTGCCGCGT GGCGTGTTGA TCGCTGCTGT CGTGAGCGCG
TTCGCGTTGC CGCTGATCGC GCCGTCGCCG TATCTGCTGC AAACCCTGAC GAACGGCTGG
ATCTACGGAC TGCTCGCGTT GAGCCTGACG CTGGTGGCAG GCACCGTGGG ACAGATTTCG
CTGGGACATG CCGCGTTGCT GCTGATCGGC GCGTACGGGT CGGCATTGCT GTCGGTGAAT
CTCGGCTGGT CTCCGGCTGT GACGATTCCG CTTGCCGGCG CGATCACTGC GTTGATCGGC
ACGCTGCTGG TCTATCCGTC GTTCCGCCTG CGCGGCCACT ACGTATCGAT CGCGACGCTC
GGCATTGGCG AGATCGTCGG CCTCGTCGTG CTGAACTGGG ACAGCCTCAC GCGCGGTCCG
GTGGGCATCA CCGGCATTCC ACCGCTTGCG CTGTTCGGCT GGCAGGTCAC GAGCGCGCGC
GCGGTCTACT GGTTCGCGCT CGCCGTGCTC GTCGTTCTTG CCTTGCTGCA GGTGCGGCTG
TTGCGCTCGC ACCTCGGGCG CACATGGCGC GCGATTCGCG AGGACGACGT CGCCGCGCGC
GCCTACGGCG TGCGGCCGAA TCGCTACAAG GCGATCGCCT TCGCCTGCGG CGGTTTCGCG
GCCGGGATCG GCGGTGGTAT TGCAGCGCAT CTGTATAGCT ACATCAACTA TCAGACCTTC
GATTCGCAAG TGTCGATTCT CGCGTTGACG ATGGTGATCC TCGGCGGCCT GGGGAGTGTA
GCCGGCGCGG TGGTGGGCGC GGTGGCGCTC ATCAGCCTGC CGGAACTGTT CCGCTTCGCG
GCCGACTACC GGATGCTGAT CTACGGCGTC GTGCTGCTCC TGCTGGTGCG CTTCCGGCCG
CAGGGTCTGT TCGGCACGGC GTGA
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| Protein sequence | MSAWFDYTIN GLIVGNIYAL LAVGLALIFG VSHLINFAHG SVYMVGGFIG WLCLTRLGLP
LPVALLATVA GCALLGMLIE RIGLRPLQGA ARIAPLLATI GISFVLDQLA QIVFGPDPRP
VPSTLPEWSF TIGGATLGSL DLLIAATGIG AAAVLYVFLR FTRLGWAVRA TAQDRDAALQ
MGVNVHAVNR AVFAIACGLG GLSGLLVGMY YNSIDPAMGF QATLKGVVAL LIGGLGNVPG
AIAGSLLLGL VESYGVALFG TSYRDLFAFV LLLLFLVWRP NGLFSANRRL PPEPLTGTFL
SYGRALRVPR GVLIAAVVSA FALPLIAPSP YLLQTLTNGW IYGLLALSLT LVAGTVGQIS
LGHAALLLIG AYGSALLSVN LGWSPAVTIP LAGAITALIG TLLVYPSFRL RGHYVSIATL
GIGEIVGLVV LNWDSLTRGP VGITGIPPLA LFGWQVTSAR AVYWFALAVL VVLALLQVRL
LRSHLGRTWR AIREDDVAAR AYGVRPNRYK AIAFACGGFA AGIGGGIAAH LYSYINYQTF
DSQVSILALT MVILGGLGSV AGAVVGAVAL ISLPELFRFA ADYRMLIYGV VLLLLVRFRP
QGLFGTA
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