| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0015 |
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| Symbol | |
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| ID | 4009524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 17726 |
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| End bp | 20269 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637952672 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_555292 |
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| Protein GI | 91780085 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAG CTCAGATAGC CGGGACTCTC GTGCAGGTTC TCGCACAAAT ACCGGACGCG
GTCGTGCTCG TGGACGAGGA CGGCGCAATC GGCTTCTTCA ATCCGGCGGC CGAAGCGCTC
TGGGGTTTGA CTGCCGCGGC GGTTCTTGGC GCGGATGCCG GCATGCTCCT GCCGCGCGGA
ATCCAGCCAG CCGGCCACGG AGTGCAAACC GGCAACGTCG ACGGCCCCGG CTTGGCTCTG
CAGATCGAGC GCAACGATGG CGTGATGCGC CGGGGCCAGA TGTCGATACA CGGGTTCGAA
GTGGCCGGCC GCAGATTTCG CGCGGCTTTC ATCCGCGACA TAACGGACCA GCACAGACAG
TGCGAAGAAT GGCAGCAGTT ATTGCGCGTG GTGAATGGAA GCGACAACGC GATCATCGTG
GCCAGTCTTG ATGGGAGCAT TTCGTTCATC AACAGCGGCG TCACCAGAAT GCTGGGATAC
GCGGCTGCCG AAGTCCAGGG CCTGCGCCTT GTCGAACCGT TCGCCGGCGT GCACACGAAC
ATGGCGGCGG TCGAACGCAT CCAGTCCGCC GCGCGGGAGC CGTCGACGCC AGATCACCCG
TTCCGCCAGG ATCTGCTCGT GTACACGAAG GGCGGCAGAC CGCTCTGGGT CAATGTGGGG
ATCACCGTCA TTACGGACAA CGCGGGCGCA CCGGTCAACC TTCTCGCGGT GCTGACCGAT
ATCACGCTGA CCAGGATGCG CGAGGAGCTT CAGCAAAAGG TGCTAGATGC GATGGCGCGC
GAGTTGCCCG CGACCGAGGT TGCCGGAATC TTGTGCCGGG AGGTGGAGCG CATCGCGCCT
GAAGTCGTGG CGACGTTTCT GCGCGTGGAC GACGGGCGGC TCTTCACGCT GGCCGCGCCA
CGCTTGCCCG TCACCGTAAC CCGGGCGATG GATGGCGAGT CGATCGGGCC GTGCGCCGGC
TCATGCGGTA CCGCCGCCTG GCGGGGCACG CCGGTCGTGG TGACGGACAT CGCCAGCGAT
CCGTTGTGGA CCGGTTACCG CGATCTGGTG CTGCCGCTCG GACTCGCCGC GTGCTGGTCG
TATCCGGTCA AGGGCGCCGA TGGCTCGGTG CTTGGCACGT TCGCGTTCTA TTACCGCGAA
AATCACGGCC CGGTTGCATT CCATCAGAGT CTCGTGGACA TGGGACTGAG TCTTTGCGCG
CTTTTGCTCG AACGCGAGAA AGCACGCATG CGCATTCATC AGCTTGCGTT TCACGACACG
CTGACCGGCC TGCCGAACCG CAATATGTTC GAGACCCAGG CGCAGCAGCT TCTGAACGAC
GCGCGCCGCA CGGAACGCGA ACTCGCGCTG GTGTTCATCG ATCTCGACCA TTTCAAGCGG
GTCAATGACA CCAGGGGGCA CGCGACAGGC GACGAGGTGC TCTGCGAGAC CGGCCGCCGC
TTCAAGTCAG TGCTTCGGGA CGGCGATCTG CTAGGCCGTC TCGCCGGCGA TGAATTCGTC
GCGATTCTGC CGCATTGCGG CGTGCATCAG GCGACGGGCA TCGTCGAGCG TCTGCTTGCC
GCGACTGCGC CGCCGGTGGT CGTGGCGGGT GCGCCAATCC ACGCGAGCGC CAGCATCGGC
ATCGCGATGT ATCCCGCGGA CGGCGAGCAC GTTCCGACAC TGCTGCGCCA GGCCGACATT
GCGATGTACC ACGCCAAGGC CAGGGGCCGC GGCCACTTCT GTTTCTTTCG CGAGGAGATG
AGCCGCAACA TCCAGGAGCA GGCAATGCTG GAGGCCGACC TGCGCGTTGC GTTGAAACAC
GACCTGCTCG ATCTTTGGTA TCAGCCGCAG TTCGACGCCG CGAACGGCCA TGTGCTTAGC
GGCGTGGAGG CGCTGCTGCG CTGGAATCAC GCGACGCTGG GCAGCGTGCC GCCGGTGCGC
TTCGTCGTGC TGGCGGAAGA ATGCGGATTG ATCGGAGAGC TGGGCAAATG GGTGACGCAG
CGGGCGTGCC GTCAACTCGC GGACTGGCGT GCCCGAGGCG TGGAGATTCC GCGGGTGTCG
ATCAACCTGT CCGCCAGCGA CTTTCGCGAC AGCACGCTGG CCGAGCGGGT TGCGCGGACC
TTGCTCGCGC ATGGTTTGCA ACCGCACGAC CTGACGCTCG AGATGACGGA GAGCGTCATG
CTGGGCGACG AGCCGGGAGT TCTGTCGATG ATCGACGAGC TGCACCGTCT GGGCATTCAA
TTGTCGCTGG ACGATTTCGG CACGGGCTAT TCGAGCCTCG GTTATCTTCA CCGCTTGCCG
CTCGACGAAC TGAAACTCGA CAGGAGCTTC GTGCGCGATC TCGATCACAG CGACTCGGCG
CGCGCGCTGA CCTCGACGGT ACTGCGCATC GGCGAGAGCC TGAACATCAA GGTCGTCGCC
GAGGGCGTGG AGACCGATAC ACAGCGACAG TTTCTGGTCG AGCATGGCTG CCCGGTGTTG
CAAGGCTATC TGCTTGCGCG CCCGATGGCA CCGCATCTGC TCGAAGAATG GCTGCGCGCG
GCTCATGCGG GCTCGCGCAT TTGA
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| Protein sequence | MAQAQIAGTL VQVLAQIPDA VVLVDEDGAI GFFNPAAEAL WGLTAAAVLG ADAGMLLPRG
IQPAGHGVQT GNVDGPGLAL QIERNDGVMR RGQMSIHGFE VAGRRFRAAF IRDITDQHRQ
CEEWQQLLRV VNGSDNAIIV ASLDGSISFI NSGVTRMLGY AAAEVQGLRL VEPFAGVHTN
MAAVERIQSA AREPSTPDHP FRQDLLVYTK GGRPLWVNVG ITVITDNAGA PVNLLAVLTD
ITLTRMREEL QQKVLDAMAR ELPATEVAGI LCREVERIAP EVVATFLRVD DGRLFTLAAP
RLPVTVTRAM DGESIGPCAG SCGTAAWRGT PVVVTDIASD PLWTGYRDLV LPLGLAACWS
YPVKGADGSV LGTFAFYYRE NHGPVAFHQS LVDMGLSLCA LLLEREKARM RIHQLAFHDT
LTGLPNRNMF ETQAQQLLND ARRTERELAL VFIDLDHFKR VNDTRGHATG DEVLCETGRR
FKSVLRDGDL LGRLAGDEFV AILPHCGVHQ ATGIVERLLA ATAPPVVVAG APIHASASIG
IAMYPADGEH VPTLLRQADI AMYHAKARGR GHFCFFREEM SRNIQEQAML EADLRVALKH
DLLDLWYQPQ FDAANGHVLS GVEALLRWNH ATLGSVPPVR FVVLAEECGL IGELGKWVTQ
RACRQLADWR ARGVEIPRVS INLSASDFRD STLAERVART LLAHGLQPHD LTLEMTESVM
LGDEPGVLSM IDELHRLGIQ LSLDDFGTGY SSLGYLHRLP LDELKLDRSF VRDLDHSDSA
RALTSTVLRI GESLNIKVVA EGVETDTQRQ FLVEHGCPVL QGYLLARPMA PHLLEEWLRA
AHAGSRI
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