| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0012 |
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| Symbol | |
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| ID | 4009521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 14332 |
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| End bp | 15093 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637952670 |
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| Product | putative short-chain dehydrogenase |
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| Protein accession | YP_555290 |
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| Protein GI | 91780083 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.891592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG TCTCGCAGGC CCCGTTGATT CTGATAACGG GCGGAGGCCG TGGCATAGGC
GCGGCGACTG CGCGGCTTGC TGCCGCACAA GGTTACGATG TAGCGATAAG CTTCGTCTCC
AACGAGTCTG CCGCCCTTGC GGTGGCGGCC GATGTGGAGG CTGTCGGGCG CCGGGCTTTA
CCCATGCGCG CGGACAGCGC CGATCCGGAG CAGGTCGCTC AGCTATTCGC CGCGCTCGAC
CGGCAGTTCG GCCGGCTCGA TGTGCTGGTG AATAACGCCG CGATCATTGC ACAGCAGTCC
CGGCTGGAGG ATCTCGGATT CGAGCGGCTG CAGCGTATTT TCGCGGTCAA CTCGATCGGC
CCTATCCTCT GTGCGCAGCA GGCGGTGAAG CGGATGTCGC GTCGTCACAA TGGTCGCGGG
GGCGCCGTGA TCAACATCTC ATCGGCATCG GCCCAGCTCG GCAGTCCAAA CGAATATGTC
GACTATGCTG CCTCGAAGGG TGCTCTTGAG ACATTCACTA CCGGTTTTGC CAAAGAAGTC
GCGCGGGATG GGATACGCGT CAACTGCATT CGCGCCGGGC ACATCTACAC CGACATGCAT
GCCAGTGGCG GCGAGCCGGG ACGGGTGGAT CGCGTCAAAG ACTCGATCCC CATGGGAAGA
GGCGGCCAAC CTGAAGAGGT CGCGCGGGCG ATCCTGTGGC TAGCGGGCGC CGAGGCGTCC
TTCATCACCG GCACGTTCCT CGATGTCACT GGCGGCAAGT GA
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| Protein sequence | MDTVSQAPLI LITGGGRGIG AATARLAAAQ GYDVAISFVS NESAALAVAA DVEAVGRRAL
PMRADSADPE QVAQLFAALD RQFGRLDVLV NNAAIIAQQS RLEDLGFERL QRIFAVNSIG
PILCAQQAVK RMSRRHNGRG GAVINISSAS AQLGSPNEYV DYAASKGALE TFTTGFAKEV
ARDGIRVNCI RAGHIYTDMH ASGGEPGRVD RVKDSIPMGR GGQPEEVARA ILWLAGAEAS
FITGTFLDVT GGK
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