Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2970 |
Symbol | |
ID | 4006879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 61604 |
End bp | 64246 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637949739 |
Product | putative fimbrial biogenesis outer membrane usher protein |
Protein accession | YP_552375 |
Protein GI | 91777167 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3188] P pilus assembly protein, porin PapC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGACT TCCCCTGTTG CCGCTCGCTC GTTCGCGCCG GTGAACCTGG CGGCGCGTTT GGGCTCAACC CCGTCGCCGC AGTTGTTGCG CTGGCGTTCG CGGTGCTGGG CGGTGTCCAG CCGATAGTCG CACAGGCGTC CGGGCAGGCC GAAGCGGGCG CGGCAGTGGA GTTCGACTCA ACTTTTCTGC GCGTCGATCC GAATGCAACG GTGGACGTCT CGCGCTTCAC GCGTGGCAAC CCGATGTCCG AAGGCGTTTA TTCCGTCGAC GTGCTGGTCA ACGGTGTGCG TGTTGCGCGC CATGATGTGC GGTTTGTGGC CACCAGCGGA ACGGCTACGG CGCGTCCCTG TTTCAGCCGG CAAATGCTGG AAACGCTCGG CGTCGATTTT GCCAGGGTCG CGGCGAGCAG CGACGCGAAG ACGCCGGCCG AAACCGGCGT TACCGGTGAA TGCGTCGACC TTGCGGCGAC CGTGCCCGAC GCGATGGTCG ACTTCGACTT CGCGGAACAA AAGATCGCCC TCAGCGTGCC GCAAAAGTAC ATGCGAAACG CTGCGCGCGG TTACGTGCCG CCTGACATGT GGCAGACCGG AGTCAACGCG GCTTTCCTGA GCTACAACGC AAACGCGTAC CACAGCGCCG GATCGGGCGT TGAATCGACG CAGAGCTATG TCGGCTTGAA TGCCGGGGTG AACCTCGGCG CGTGGCACTT CCGCCATCAG TCGTCGGTGA CGCAGCAAGC TGGCGCAGCC ACACAATTCG ACAACATCGC GACTTACCTT CAGCGTGACA TCACCAGAAT AAAGTCGCAA TTGACGGTCG GCGACGGCTA CACGACCGGC GATGTATTCG ACAGCGTGCA GTTTCGCGGC GCGCAGATCG CCACCGACGA CCGCATGCTG CCGGAATCCT TGCGAGGCTA CGCGCCGATC GTGCGCGGCA CGGCTGAATC GAACGCGCGC GTGACGGTTC GTCAGAACGG CCAGGTGATC TATGAAACCA CCGTTTCGCC GGGTCCGTTC GAAATCAACG ACCTTTACGC GACCGGCTAT GGCGGCAACC TGGATGTCAC CGTCACCGAA GCCAATGGCC GTACCAAAAG CTTCACTGTG CCTTACGCCT CGGTTGCCCA GTCATTGCGG CCCGGCACCA CACGGTTTTC AGTCACCGCC GGCGAGCTCC GCAATTCCAC GCTCGAGACA AACCCGAATT TCGCGCAGTT CACGCTACAG CGCGGGCTGA CCAATCTGGT CACGGTCTAT GGTGGTGCCG TGGCCGCTAA TGGTTACATG GCCGCCGACA TGGGCGCCGC ACTGAACACG AAGTTCGGCG CGCTGTCAGC CGACGTGACA GGCGCTCAAA CGCAGATTCC GGATCACGGC ACGTTGCGCG GCACGAGCTT GCGCATCGGT TACAGCAAGT TCATCGATCC GACCAACACG AACATTGCAA TCGCAGCGTA TCGCTATTCG ACGGCGGGGT ACATGAACCT GTCGGATGCC GCGTCCGTGC GTGACCTCGC CATGCACGGC GGCAATCCGG ATTCGGTGTA CCGGCAGCGC AACCGTTTTC AGGTCACGCT CAATCAGAAC TTCAAGGAAT ACGGCACGGT CTTTCTGAAC GCTTCCGCCC AGCAATACTG GAATCGCAGC GGCAGCGACG TGTTCTACCA GGCCGGCTAC ACCAACCGTT TCAAGTACGG TACGTACAGT ATCAGCGCGG GGCGCACGCG CAACTCGAAC GGGTCAATGT CGGATCAGAT TATGTTGAGT ACCACGTTGC CGCTCGGTCG CGACCAGCAT TCGCCGCTGC TGTCGGCGAA CCTCAGCAGT TCCGGTGGAA ACGCCAACCT GCAGGCCAAC GTGAGCGGCT CGTTGGGCGA GCGCAACCAG TTCTCGTACA GCGGGTATGG GGCGTACGGC GACGGTCCGG GCGCCAGCAC GGCGAGCGCG GGCGCGAGCG GCACCTATCG CACGCCGTAC GCGCAGTTGA CGGGATCGGC GAGCGGCGGA ACCGGCTCCA GCCAGGTGTC GGCGGGTATC AGCGGGTCGA TCGTCGCGCA TCCGGGCGGT GTCACGTTCT CGCAGACGGT GGGTGACACG TTCGGCGTGA TCGAAGCACC GGGCGCAGCA GGCGCGAGCG TGACCAGTTC GCCCGGCGTG AAACTCAATG GGCGCGGCTT TGCGGTCGTT CCGTACCTGA CACCCTATGG CATCAACACG GTGGATATCG ATCCGAAGGG CACGTCGACC GATGTCGAGT TTGAATCGAC GTCGGAGCAG GCGGTGCCGC GGCTGGGCTC AGTGGTGATG ATCAGGTACA AGACGGTGAC CGGACGCGCG GCATTGATTC GTGCGCCGCA ACTCGGCGAC AAGGCGCTGC CGTTTGGCGC GGACGTGGTC GATGCAACCG GGCGGACGGT AGGCGTCGTT GCGCAGGACA GTCGGATTTT CGCGCGCGGG CTCGAGGACA AAGGCTCGCT GTTCGTGAAA TGGGGCGCGT CGGCTTCCGA GCAATGCCGC ATCGAGTACG TGTTGCCGAG GCAAACGGGT AAAGCAGGAG CGGCCTACAC GTCTGTGGAA GGGCATTGTG TGGGCGGGAC ACCAACCGAA AACACGAACT TTGCTTCTGG CCGTACCAGG TAA
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Protein sequence | MKDFPCCRSL VRAGEPGGAF GLNPVAAVVA LAFAVLGGVQ PIVAQASGQA EAGAAVEFDS TFLRVDPNAT VDVSRFTRGN PMSEGVYSVD VLVNGVRVAR HDVRFVATSG TATARPCFSR QMLETLGVDF ARVAASSDAK TPAETGVTGE CVDLAATVPD AMVDFDFAEQ KIALSVPQKY MRNAARGYVP PDMWQTGVNA AFLSYNANAY HSAGSGVEST QSYVGLNAGV NLGAWHFRHQ SSVTQQAGAA TQFDNIATYL QRDITRIKSQ LTVGDGYTTG DVFDSVQFRG AQIATDDRML PESLRGYAPI VRGTAESNAR VTVRQNGQVI YETTVSPGPF EINDLYATGY GGNLDVTVTE ANGRTKSFTV PYASVAQSLR PGTTRFSVTA GELRNSTLET NPNFAQFTLQ RGLTNLVTVY GGAVAANGYM AADMGAALNT KFGALSADVT GAQTQIPDHG TLRGTSLRIG YSKFIDPTNT NIAIAAYRYS TAGYMNLSDA ASVRDLAMHG GNPDSVYRQR NRFQVTLNQN FKEYGTVFLN ASAQQYWNRS GSDVFYQAGY TNRFKYGTYS ISAGRTRNSN GSMSDQIMLS TTLPLGRDQH SPLLSANLSS SGGNANLQAN VSGSLGERNQ FSYSGYGAYG DGPGASTASA GASGTYRTPY AQLTGSASGG TGSSQVSAGI SGSIVAHPGG VTFSQTVGDT FGVIEAPGAA GASVTSSPGV KLNGRGFAVV PYLTPYGINT VDIDPKGTST DVEFESTSEQ AVPRLGSVVM IRYKTVTGRA ALIRAPQLGD KALPFGADVV DATGRTVGVV AQDSRIFARG LEDKGSLFVK WGASASEQCR IEYVLPRQTG KAGAAYTSVE GHCVGGTPTE NTNFASGRTR
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