| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2874 |
|---|
| Symbol | |
|---|
| ID | 4006761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 177374 |
|---|
| End bp | 178924 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637949835 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_552471 |
|---|
| Protein GI | 91777263 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.352356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGCA TCGTAGGCGT AGTTTCCCAC TCTCCGGTCA ATCAGCTGAT CTATGACAGC
CTGCTGCTTC TGCAGCACCG CGGTCAGGAC GCCGCCGGCA TCGCGACGGC GAACGGCAGC
AATTTCCACA TGCACAAGGC GAACGGCATG GTGCGCGACG TGTTCCGCAC GCGCAACATG
CGCAGCCTGC CCGGCACGAC CGGTATCGGC CAGGTCCGCT ATCCGACCGC CGGTTCCGCG
TCGAGCGAAG AAGAAGCCCA GCCGTTCTAC GTGAACGCGC CGTTCGGCAT TATCCTCGCG
CACAACGGCA ATCTGACCAA CTGGCAGCAA CTGAAAGATG AGATGTTCCG CATCGATCGC
CGCCACATCA ATACCAATTC CGACACGGAA GTGATGCTCA ACGTGCTCGC GCACGAATTG
CAGCTTTCCA GCTCGGGCCT GCAACTCGAT CCGGCTGCAC TGTTCAACGC CGTGTCGGGC
GTGCATCGCC GGGTGCGCGG TTCGTACGCG ATCGTGTCGC TGATCGCCGG TTACGGCCTG
CTCGGCTTCC GCGACCCGTT CGGCATCCGC CCGCTGTGCC TCGGCAAGCA GGAAACGGCC
GAAGGCGTCG AGTGGATCCT CGCGTCGGAG TCGGTGGCGA TCGAAGGTAT CGGCTTCGAA
TTCGTGCGCG ACGTGGCGCC GGGCGAAGCG ATTTTCATCG ACCTCGAAGG CAATCTGCAC
TCGCAGCAAT GCGCGACGAA CCCGAGCCTG AACCCCTGCA TTTTCGAACT CGTGTATCTC
GCGCGTCCGG ATTCGGTGCT CGACGGCGTG CCGGTGTACA ACGTGCGTCT GCGCATGGGC
GACTACCTCG CCGAGAAGAT CAGGCGCGAA CTGCCCGACG TCGCGATCGA CGTCGTGATG
CCGATTCCCG ATTCGTCCCG TCCGGCCGCC ATGCAGGTTG CGAAGAAGCT GGGCGTTGAA
TACCGCGAGG GTTTCTTCAA GAACCGTTAC GTTGGCCGCA CCTTCATCAT GCCCGGCCAG
GCCGTGCGCA AGAAGTCGGT GCGCCAGAAG CTGAACGCGA TGGGCATCGA GTTCAAGGGC
AAGAACGTGC TGATCGTCGA CGACTCGATC GTGCGCGGCA CCACGTCGCA TGAAATCGTG
CAGATGGCGC GCGATGCCGG CGCGAACAAG GTGATCTTCG CTTCGGCGGC GCCGCCGGTG
AAGTTCCCGA ACGTCTACGG CATCGACATG CCCACGCGCG GCGAACTCGT CGCCCACGGC
CGCTCGGACG ACGAAGTCGC GCGCATGATC GGCGCGGACC ATCTCGTTTA TCAGGACGTC
GACGCGCTCA AGCAGGCCGT GCGCGATATC AACCCGGCGC TGAAGGAATT CGAAGCGTCG
TGTTTCGACG GTAACTACGT GACCGGCGAC GTTACCACCG AGTACCTGGA TCGCATCGAA
ACGGCGCGTC TCGCACCGTC CTCGCAATCG GACCGCGACG CCGCAAGCGA AGCGCTCGAC
GGCGGCGGCC CGGCCCGTTC GCAACTGCAT CTGCAACTGT CGGTAGGTTG A
|
|---|
| Protein sequence | MCGIVGVVSH SPVNQLIYDS LLLLQHRGQD AAGIATANGS NFHMHKANGM VRDVFRTRNM
RSLPGTTGIG QVRYPTAGSA SSEEEAQPFY VNAPFGIILA HNGNLTNWQQ LKDEMFRIDR
RHINTNSDTE VMLNVLAHEL QLSSSGLQLD PAALFNAVSG VHRRVRGSYA IVSLIAGYGL
LGFRDPFGIR PLCLGKQETA EGVEWILASE SVAIEGIGFE FVRDVAPGEA IFIDLEGNLH
SQQCATNPSL NPCIFELVYL ARPDSVLDGV PVYNVRLRMG DYLAEKIRRE LPDVAIDVVM
PIPDSSRPAA MQVAKKLGVE YREGFFKNRY VGRTFIMPGQ AVRKKSVRQK LNAMGIEFKG
KNVLIVDDSI VRGTTSHEIV QMARDAGANK VIFASAAPPV KFPNVYGIDM PTRGELVAHG
RSDDEVARMI GADHLVYQDV DALKQAVRDI NPALKEFEAS CFDGNYVTGD VTTEYLDRIE
TARLAPSSQS DRDAASEALD GGGPARSQLH LQLSVG
|
|---|
| |