Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2720 |
Symbol | |
ID | 4006681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 353935 |
End bp | 355098 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637949987 |
Product | OmpC family outer membrane porin |
Protein accession | YP_552623 |
Protein GI | 91777415 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA TGAGTCAGAG TATTTGCGGG GCAAGCTTGA TTCTCGCCGC AGGAGGAGCG GCGGCCCAAT CGAGCGTCAC GCTGTACGGG GTAGCGGACG TGTTCGTCCA GTATCTGGAT AACGGTGGAA ATCATTCGTT TTCCGAACGA AGCGGCGGTT CGACCGGTTC CCTGTTCGGC CTGAAAGGGA GCGAAGATCT CGGTAACGGG CTGAAGGCGG TGTTCGACGT CGAAACCGGC TTCAACCTCA ACAACGGAGC GTTTTTTGCC GACAGCACGG CGATGTTCTA CCGGCAGTCG TGGGTGGGAC TCAAGCACGA TTCCTATGGC CAGCTGAGCT TCGGCCGCCA GTATCAGCCG AGCTTCTGGG CCGTCTACTT CACCGATCCG TTCCGCGGCA ATGAAGTGAT GTCACCGCTG GCAGCCGCCG ACCTCGCCGG CGCAACCGAT CGCTCCACGC TCGCAACGCA GTACGTGTCC GGACGAACCA GCAATTCGAT CGTCTACACG TCACCCGACA TGAGAGGCGT GCATGTCTAC GCCATGTACG GGATGCCGGC CACGGTGACG CAGCCTGTGC CGGTGCGGTC CGGCGCGATG ATCGACCTGG CGGCGAATTA TTCGGGCTAT GGTTTTTACG CCGGTGTCGG TTACCAGTAT CAGCATGGAT CGCAGGAGAC CGCGCCGCTG GTGGCTGCCG CCCCGTCCCT GCTGACCACG TTCGACCTGA TGGGAACGGA GCACTTTACC GGCGCGCTCG CCTACCGGTG GGGCATCGTC AATTTTCAGT TCAACTACTC GTATAACAGG CCGAAAGATG CGCCGGCAGG CGCGCTGGTC ACGGTTACGC CGACGGTCAA GTTGCCGCTT GCTTCGCTGG TTCACTCGTA CAGCATTATC GAGTTGGGCG CGACGATTCA GGCCACGCCG GCGGACGTGA TCGAAATCGC CGGCATCGAG CGGGATGTGC GTGGCGTTCA CGACAACACG CCGGGTATCG AAGTCGGCGT CGACCACAGC CTGTCCAAGC GTACGAGCCT CTACATGCGC GCGGGCTACC TGAAGAACAA CGGCACGGCA AACATGAGCT GGCCTGGCAC CACGGGCGTC GCTAGCGGTT CGAAGCAGAT TCTTGCGGTG CTCGGCATGA CGCATCGTTT CTAA
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Protein sequence | MRFMSQSICG ASLILAAGGA AAQSSVTLYG VADVFVQYLD NGGNHSFSER SGGSTGSLFG LKGSEDLGNG LKAVFDVETG FNLNNGAFFA DSTAMFYRQS WVGLKHDSYG QLSFGRQYQP SFWAVYFTDP FRGNEVMSPL AAADLAGATD RSTLATQYVS GRTSNSIVYT SPDMRGVHVY AMYGMPATVT QPVPVRSGAM IDLAANYSGY GFYAGVGYQY QHGSQETAPL VAAAPSLLTT FDLMGTEHFT GALAYRWGIV NFQFNYSYNR PKDAPAGALV TVTPTVKLPL ASLVHSYSII ELGATIQATP ADVIEIAGIE RDVRGVHDNT PGIEVGVDHS LSKRTSLYMR AGYLKNNGTA NMSWPGTTGV ASGSKQILAV LGMTHRF
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