Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2688 |
Symbol | |
ID | 4006713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 390220 |
End bp | 390981 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637950019 |
Product | putative short-chain dehydrogenase/reductase |
Protein accession | YP_552655 |
Protein GI | 91777447 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.00737527 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCG TTCCGCAGGC ACCCTTGATT CTGATAACGG GCGGAGGCCG TGGCGTGGGC GCGGCGACTG CGCGGCTCGC TGCCGCACAA GGTTACGATG TCGCGATAAG CTTCGTCTCC GACGAGTCTG CCGCTCTTGC GGTGGCGGCC GACGTGGAAG CGGCCGGACG CCGGGCTTTA GCCGTGCGCG CGGACAGCGC GGATCCCGAG CAGGTCGCCC GGCTATTCGC CGCGATCGAC CGGACGTTCG GCCGCATCGA CGTGCTGGTG AATAACGCCG CGATCATTGC AAAGCAGTCC CGCCTGGAGG ACCTCGAATT CGCGCGGATG CAGCGTATCT TCGCGGTCAA CTCGATCGGC CCGATCCTCT GTGCGCAGCA GGCGGTGAAG CGGATGTCGC ATCGTTACAA TGGCCGAGGC GGCGTCGTGA TCAACATCTC CTCGGCATCG GCCCGGCTCG GCAGTCCAAA CGAATATGTC GACTATGCTG CGTCGAAGGG TGCGCTCGAG ACATTCACTA CCGGTTTTGC AAAAGAAGTC GCGCGGGACG GAATACGCGT CAACTGCATT CGCCCCGGGC ACATCTACAC CGACATGCAT GCAAGCGGCG GAGAGCCGGG ACGGGTAGAT CGCGTCAGGG ACTCGATCCC GATGGGAAGA GGCGGGCAGC CTGAAGAGGT TGCGCGGGCG ATTCTATGGC TGGCAAGCGC CGAGGCCTCC TTCATCACCG GCACGTTCCT CGACGTCACC GGCGGCAAGT GA
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Protein sequence | MNTVPQAPLI LITGGGRGVG AATARLAAAQ GYDVAISFVS DESAALAVAA DVEAAGRRAL AVRADSADPE QVARLFAAID RTFGRIDVLV NNAAIIAKQS RLEDLEFARM QRIFAVNSIG PILCAQQAVK RMSHRYNGRG GVVINISSAS ARLGSPNEYV DYAASKGALE TFTTGFAKEV ARDGIRVNCI RPGHIYTDMH ASGGEPGRVD RVRDSIPMGR GGQPEEVARA ILWLASAEAS FITGTFLDVT GGK
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