| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2569 |
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| Symbol | |
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| ID | 4006929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 536715 |
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| End bp | 538712 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637950138 |
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| Product | sigma 70 (RpoD) |
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| Protein accession | YP_552774 |
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| Protein GI | 91777566 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000108997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.136917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCTT TTGATCGCGA AGATTCGCAA CACGAAACCG CCGGCTACGC CGCCAAAGCT
CCCTCGGGCC GCACGGCCAA GGGCAAGGGC GCCGGCAAAG CGATCCCCGT GGCGGCCGAA
CTGCCGCCGC AGCAAGCTGA GGAACGTCAG CGCCAGATGC GTGCGCTGAT CCAGTTGGGC
AAGGAACAGG GTTATCTTAC CCACGCGCAG ATCAACGACC ATCTGCCCGA CAACTTCGCG
CAAACGGCCG CGATCGACAG TATTGTCAGC GCGTTCAACG ACATGGGCGT GCAGGTCTAC
GAGCAGGCGC CGGACGCAGA AACGCTGCTG CTCAACTCGA ACGCCCCTGC CGTGGTGTCG
GACGATCAGG CAGACGAGGA AACCGAAGTC GCCCTGTCGA CCGTCGATTC CGAATTCGGC
CGCACAACCG ACCCCGTGCG CATGTACATG CGCGAAATGG GCGCGACCGA ACTGCTGACG
CGCGCCGGCG AAATCGCGAT TGCCAAGCGC ATCGAAGACG GCCTGCACGA AATGGTGCAG
GCAATCGCTG CTTGCCCGCT CGCGATCTCG GCGATTCTGG CGAGCGCCCA ACAGGTTGCC
GACGGCGAGC TGCGCATCGA CGAACTGGTC GACGGCCTCA ATGAAGACAC GATCGCCGCC
GAAGAAGACA GCGCAAGCGC GGAAGCATCG GCCGAAGTCG ACGCGGACAC GGACGGCGAC
GAGGACGAAG ACAGCGACGA CGACGTCGGC CCCGCTGACT CGTCGGCAGC AGACGAAGCA
CGCCTGAAGC AGCTCACGAG CGACTGCCTC GAAATCTTCG CGCAAGTCGG CATGCTGTCC
GACCAGATGA ACGCCTCGCA CACGCGCGGC GACGTCACCT CGAAGGCGTA TCAGCGCGCG
CGCGAAGAGA TCCAGCAGCA CCTCGCGAAG ATCCGCTTCA CGGCACGCAC CATCGACCGC
CTGTGCGGCG ACGTGCAGCA ACAGGTCGCG CAAGTTCGTG CGATCGAGCG CAACATTCTG
CAAATCGTTG TTTCGAAGAG CGGCATGCCG CGCGAGAAGT TCATCGAGTC GTTCGCCGGT
CATGAAGCCG ACCTCGGCTG GACGGAACGT GCGGCGCGCG GTGCGTCCGC CTACGGCGCG
GCGCTGGAGC GCCATTTGCC GGCCATTCAG TCCGAACAGC AAAAGCTGAT CGAAATCGAA
GCCACGGTTT CGCTGCCGCT GAAGCATCTG AAAGAAATCA ACCGCCAGAT GGTCGCGGCC
GAATCGAAGA TGCGCAAGGC GAAGAGCGAG ATGATCGAGG CGAATCTGCG TCTCGTGATC
TCGATCGCGA AGAAGTATGT GAATCGCGGC ATGCTGTTCC TCGACCTGAT CCAGGAAGGC
AACATCGGCT TGATGAAGGC CGTGGACAAG TTCGAATACC GCCGCGGCTG GAAGTTCTCC
ACGTACGCAA CGTGGTGGGT CCGCCAGGCT GTCACGCGTT CGCTTGCGGA TCAGGCTCGC
ACGATCCGCG TGCCGGTGCA CATGATCGAA ACGATCAACA AGCTGAACCG CATTTCGCGC
GAAATCCTGC AGCAGACCGG TCAGGAAGCG CATCCGTCCG TGCTCGCGGA ACGCATGGAA
CTCTCGGAAG AGAAAGTGCG CGGCATTCTG AAGATCGCCA AGCAGCCGGT GTCGATGGAA
ACGCCGGTTG GCGACGACGG CGATGCCACA CTCGGCGACA TGATCGAAGA CTCGGCAGCT
TCTTCGCCGG CCGACGCGGC CATGCAGGCC GACTTGCGCG CCGCCATCGA CGACGCGCTC
GACTCGCTGT CGCCGCGCGA AGCCAAAGTG CTGCGCATGC GTTACGGCAT CAACACGAAG
TCGGACCATA CGCTCGAAGA AGTCGGCAAG CAGTTCGACG TTACGCGTGA GCGGATTCGT
CAGATCGAGA GCAAGGCCAT GCGCAAGCTG ATGCATCCGA GCCGCGCCGA TCGTCTGAAG
TCGTTCCTCG ACCGCTAA
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| Protein sequence | MNPFDREDSQ HETAGYAAKA PSGRTAKGKG AGKAIPVAAE LPPQQAEERQ RQMRALIQLG
KEQGYLTHAQ INDHLPDNFA QTAAIDSIVS AFNDMGVQVY EQAPDAETLL LNSNAPAVVS
DDQADEETEV ALSTVDSEFG RTTDPVRMYM REMGATELLT RAGEIAIAKR IEDGLHEMVQ
AIAACPLAIS AILASAQQVA DGELRIDELV DGLNEDTIAA EEDSASAEAS AEVDADTDGD
EDEDSDDDVG PADSSAADEA RLKQLTSDCL EIFAQVGMLS DQMNASHTRG DVTSKAYQRA
REEIQQHLAK IRFTARTIDR LCGDVQQQVA QVRAIERNIL QIVVSKSGMP REKFIESFAG
HEADLGWTER AARGASAYGA ALERHLPAIQ SEQQKLIEIE ATVSLPLKHL KEINRQMVAA
ESKMRKAKSE MIEANLRLVI SIAKKYVNRG MLFLDLIQEG NIGLMKAVDK FEYRRGWKFS
TYATWWVRQA VTRSLADQAR TIRVPVHMIE TINKLNRISR EILQQTGQEA HPSVLAERME
LSEEKVRGIL KIAKQPVSME TPVGDDGDAT LGDMIEDSAA SSPADAAMQA DLRAAIDDAL
DSLSPREAKV LRMRYGINTK SDHTLEEVGK QFDVTRERIR QIESKAMRKL MHPSRADRLK
SFLDR
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