| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2439 |
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| Symbol | |
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| ID | 4007065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 688224 |
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| End bp | 690101 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637950272 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_552902 |
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| Protein GI | 91777694 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.255171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC TGATCGCGTG TTCGAAGCTC GAAATGACCA CGCTTTATCA GCAACTGGCC
GATCCCGAAC TGGCGGTCGT GCTGGTCGAC GCGGGCGGCA TGATCGTCCA TCAGGTTTCG
TCGGTGCCTT TCGCCGAGGC AGTCGCGGCG GACGGCTTTC GCGTCGGCGC GTTGTGGAGC
GAGCGCGAGG CCGGCACGAA CGGCATGGGC ACGTGTCTGG CCGAGCGCGA CTGCATCGCC
GTCTGCCAGC ATGAACATTT CTATCCGCGC TATACGTCGC TCACCTGCTC CGCCGCGCCG
ATTTTCGATG ACCGCGGCGA GATTGCCGGC GTGCTGGACG TAACGAGCCG CTCGAAGCTG
TTGCAGCAGC ATTCGCTGGT GCTGGTCGGC ATGTCGCGGC AAATGATCGA GAACCGTCTG
CTGGATGCGC GTTACCGGCA CGCGAACATG ATTCATTTCC ATAGCCGCCC GGAATTCGTC
GGTACGCTGC ACGGCGGCAA ACTGGCGGTA GCGGACGACA GCACGGTGCT CGCCGCGAAC
CGCAGCGCCC TCTTCCAGCT CGGCTTCCGC ACGCTCGGCG AATTGCGCGG CCGGCGTATC
GAGGAAGCCT TCAATGCGTC GCTCGAAGAC ATGATCGCGC GCAGCATTCG CGGGTCGTTT
CATCCGGTCA CCGTGTATAG CGCGAACGCG ACCAACCGCT TCTTTCTCGT CGCGCAGACG
CCGCAAAACA GCGCGGAGCG CGGCACGCGG GTGGCGATAA CAGCGCCGGG CGCGCGCGCG
AGCGCCGCGG ACAAACGGCC GGCGCCGGCA CGGCTCGACG AAATCGCGCA CCTGGAGTTC
GGCGACCCGC GCATGGCTTC GCAAATCCAG CTCGCGGCGC GCGTGGTCCA GCGCAAGATT
CCGATCATCC TGAGAGGCCA AACGGGCACC GGCAAGGAAG TCTTCGCGCA GGCGCTGCAT
AGCATCAGCC CGCACGCGGC AGGCCCGTTC GTGCCGGTGA ATTGCGCATC GCTGCCAGAA
AACCTGATCG AAAGCGAGCT GTTCGGCTAT CGTGCCGGCG CGTTTACCGG CGCCCAGCGC
GAAGGACGGC GCGGCAAGAT CGTGCAGGCC AACGGCGGCA CCCTCTTTCT CGATGAAATC
GGCGACATGC CGCTCTCGTT GCAGGCGCGG CTTCTGCGCG TGATCGAAGA GCACGAAGTC
ACGCCGCTCG GCGCGGAAAC GACCATCAAG GTGGATTTTC AGCTCATTAG CGCCAGTCAC
CGCAATCTGC TCGAACTCGT GCATGGCGGT CAGTTCCGCG AAGACCTGTA CTACCGGCTC
AAGGGCGTCG AACTGAATCT GCCGCCGCTT AGCGAACGGA TCGACAAGCT CGCGCTGATT
CATCATCTGC TCGAAAACGA GTCCGACAAC GATCCGCCCG AGTTGACGCC GGAGGCCGAG
CACGCGTTGC TGACCTATGC GTGGCCCGGC AATATCCGCC AGTTGCGCCA CGTATTGCAG
ATGGCCATCG CGCTATGCGA CGGACAACCA ATCCGTTGCG AGGACCTGCC TGCCGAAATC
ACACAACGTG GGCCGGAAAC CGGGCTGCTC GCCGTTTCGC GCACGGCAGC GGCGGACTTC
GAGCCGCATC CGGCCGACGA AGCGGATCTC TCCTCGCTCA ATGCGATTCA GTTGAACGAA
CGCGGGACCG TGCTTACGCT GCTCGACGAG CATCGCTGGA ACGTCAGCAA CGTTGCGAAG
GCGCTCAGCA TCAGCCGCAA CACGCTGTAC CGCAAGATGC GCCGGCTGCA TATCCGTCTG
TCGCACGACG GCTCGGCGCC CGACGGATTG CCGCCCGACG ATTCGCCATC CGAAGAATCG
CCGCCTTTCA GCGCATGA
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| Protein sequence | MGDLIACSKL EMTTLYQQLA DPELAVVLVD AGGMIVHQVS SVPFAEAVAA DGFRVGALWS
EREAGTNGMG TCLAERDCIA VCQHEHFYPR YTSLTCSAAP IFDDRGEIAG VLDVTSRSKL
LQQHSLVLVG MSRQMIENRL LDARYRHANM IHFHSRPEFV GTLHGGKLAV ADDSTVLAAN
RSALFQLGFR TLGELRGRRI EEAFNASLED MIARSIRGSF HPVTVYSANA TNRFFLVAQT
PQNSAERGTR VAITAPGARA SAADKRPAPA RLDEIAHLEF GDPRMASQIQ LAARVVQRKI
PIILRGQTGT GKEVFAQALH SISPHAAGPF VPVNCASLPE NLIESELFGY RAGAFTGAQR
EGRRGKIVQA NGGTLFLDEI GDMPLSLQAR LLRVIEEHEV TPLGAETTIK VDFQLISASH
RNLLELVHGG QFREDLYYRL KGVELNLPPL SERIDKLALI HHLLENESDN DPPELTPEAE
HALLTYAWPG NIRQLRHVLQ MAIALCDGQP IRCEDLPAEI TQRGPETGLL AVSRTAAADF
EPHPADEADL SSLNAIQLNE RGTVLTLLDE HRWNVSNVAK ALSISRNTLY RKMRRLHIRL
SHDGSAPDGL PPDDSPSEES PPFSA
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