Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2339 |
Symbol | |
ID | 4007165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 793238 |
End bp | 794311 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637950370 |
Product | secretion protein HylD |
Protein accession | YP_553000 |
Protein GI | 91777792 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.581598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCA GCAGAAAAAA ACTGACGCTC GGCGTCGTCT TACTGGCCGT GATCGTCGTG GCCGTCTACT ACGGCTGGAC GCTCCTGCAC GACTCGGGTC CCGCAGCAGG TTTCGCGAGC GGCAACGGCC GCATCGAGGC AACCGAAATC GACGTCGCGA CCAAACTGGC AGGCCGTGTC GAAACCATTG CCGTCGACGA AGGCGACTTC GTCAAGGCGG GGCAGCCGCT TGCGACCATG CAGGTGACCG TGCTCGACGC GCAGCTCGCC GAAGCCCACG CGCAACATCA GCAGGCGATC AACACCGCGC TCAGCATCGA AGCGCAGGTC GTACAGCGGC AGAGCGACAA GGCGGCTGCC GAAGCCGTGG TCTCCCAGCG CGAAAGCGAA CTGGACGCCG CACAACGCAA GCTGGCGCGC TCGGAAACCC TGTCGCGCGA CGGCGCGTCC TCCATGCAGG AACTCGACGA CGATCGCGCC CGCGAGCGCG GCGCGGAAGC GACGGTCCGG GCCGCGAGAG CCCAGGTCAC CGCCGCCCAG GCGGCCGTCG ACGCGACACG CGCGCAACTG GTGGCCGCGC ATTCGGCGGA ACGCGCCGCG CTCGCGACCG TTGCGCGCGT CGAAGCCGAC ATCAGCGACA GCCAGTTGAC GGCGCCGCGC GACGGCCGCG TGCAATATCG CATCGCCGAG GCCGGTGAAG TGCTTCCCGC GGGCGGCAAG GTCCTGAACA TCGTCGACCT CTCCGACGTC TACATGACGT TCTTCCTGCC GGAGACGGTG GTCGGCAAGG TCGCGCTGGG CGCCGAAGTG CGCGTGATAC TCGATGCGGC GCCCACCTAT GTGATTCCCG CAACCGTTTC CTTTGTCGCC AGCACCGCGC AGTTCACGCC GAAGACCGTG GAAACCAGCA GCGAACGCCA GAAACTGATG TTCCGCGTCA AGGCGCGCAT CAACCGCGAA CTGCTGCTGC AGCATCTGAA GCTCGTCAAG ACAGGCCTGC CGGGCGTCGC GTGGATCAGG ATCGATCTGC ACGCCGCGTG GCCCGCTTCG CTCGCGATCA AGGTGCCGCA GTGA
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Protein sequence | MSPSRKKLTL GVVLLAVIVV AVYYGWTLLH DSGPAAGFAS GNGRIEATEI DVATKLAGRV ETIAVDEGDF VKAGQPLATM QVTVLDAQLA EAHAQHQQAI NTALSIEAQV VQRQSDKAAA EAVVSQRESE LDAAQRKLAR SETLSRDGAS SMQELDDDRA RERGAEATVR AARAQVTAAQ AAVDATRAQL VAAHSAERAA LATVARVEAD ISDSQLTAPR DGRVQYRIAE AGEVLPAGGK VLNIVDLSDV YMTFFLPETV VGKVALGAEV RVILDAAPTY VIPATVSFVA STAQFTPKTV ETSSERQKLM FRVKARINRE LLLQHLKLVK TGLPGVAWIR IDLHAAWPAS LAIKVPQ
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