| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2338 |
|---|
| Symbol | |
|---|
| ID | 4007166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 794308 |
|---|
| End bp | 795720 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637950371 |
|---|
| Product | efflux ABC transporter outer membrane protein |
|---|
| Protein accession | YP_553001 |
|---|
| Protein GI | 91777793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCG CGCCGCACTA CGTACGCCCC GCGCTGCCGG TTCCCGACAC CTGGGCCACC
GGGTCTTCCG CCGACGGAAC ATTGTCCGCG GACGCCACAC CGGCCGCCAG CCGGATCGAC
TGGCGCAGCT ATTTTCCCGA CGCCCAACTG CAGGCCCTGA TCGAGCAGGC GCTGACCGGC
AACCGCGAGT TGCGCATTGC CGTGCAGCGC GTCGAAGAAG CGCGTGCAAC GTACGGTATC
CGGCGCGCCG ACACGCTTCC GACGATCTCC GCAGGCGGCT CCTATGTCCG TTTCCGCTCG
CCGGGCGGAC TCCTGCCCGG CGGAAGTTTC GACGGTGAGG CGTATCAGGT CGGACTGATG
GAAAGCAATT GGGAACTCGA CTTCTGGGGC CGCGTGCGCA ACCTCAAGGA CGCAGCCCTC
GAGGAATTCC TGGCGAGCGA CGCCGCGCGC CGCGCGGCCA CCATCAGCGT GATCGCAAAC
GTAGCGGACA ATTATCTGCT GCTGCGCGAA CTCGATGAAC GTATCGCCGT TGCACGCGAG
ACGATCGCAA GCCGCGCCGA ATCGCTGCGA ATTTTCCGCC GCCGCTTCGA GGTCGGGGCG
ATCTCGAAGC TCGATCTGCG GCAGTCGGAA ATTCTTTTTC AGCAGGCGCA AACGCTGGTT
GCGCAACTGG AACAGTCACG AGCCACTCAG GCCCACGCGC TCGCCGTCCT GGTCGGCGCG
CCCGCCCCGC TGCAGCCGGC GCCGCTGGAC GACGCGAGCG TATGCCCGGA TCTGCATGCG
GGACTGCCTT CGTCGTTGCT GGAGAGGCGT CCGGACATTG TCGCGGCGGA ACACCGGCTG
CGGGCCGCGA ACGCGAATAT CGGCGCGGCA CGCGCGGCGT TCTTTCCGCG CATCACGCTC
ACGGGCGCGG TCGGCTCGAC GAGCACCGAT CTTCAGAACC TATTCGCATC GGGTAGCGGT
GCGTGGATCT TCACGCCCAA CATCTCGCTG CCCATCTTCG ATGCCGGGCG CAATCGCAGC
AATCTCGAAC TCGCGAAGGC CCGCGAAGGC GAAGCGGTGG CGCAATACGA AGAAACCATT
CAGGACGCCT TTCGCGACGT AGCCGATGCG CTGTCGGCCA GAGTGTGGCT CGCCACGCAG
GTTCAGGCGG AAACCGACAC GCTGGTGGCG CAGTCCGAAC GTGCGCGCCT TGCCAGGCAG
CGATACGACA ACGGCGCGAC ACCGTTCCTG GAAGTGCTCG ACGCGCAGCG CGACCTGCTC
GACGCACGGC AGCAACTGAT ACAGACGCGG CGCGCATTGC TCACGAGCCG CGTCGCGCTT
TATGCCGCGC TCGGTGGAGG CGTGCAGGAC GCAGATCCGG CGCCCCCGCC TTCAGCCGCC
GACATCACAC TCAAACAAGG CCCATTGCCA TGA
|
|---|
| Protein sequence | MSLAPHYVRP ALPVPDTWAT GSSADGTLSA DATPAASRID WRSYFPDAQL QALIEQALTG
NRELRIAVQR VEEARATYGI RRADTLPTIS AGGSYVRFRS PGGLLPGGSF DGEAYQVGLM
ESNWELDFWG RVRNLKDAAL EEFLASDAAR RAATISVIAN VADNYLLLRE LDERIAVARE
TIASRAESLR IFRRRFEVGA ISKLDLRQSE ILFQQAQTLV AQLEQSRATQ AHALAVLVGA
PAPLQPAPLD DASVCPDLHA GLPSSLLERR PDIVAAEHRL RAANANIGAA RAAFFPRITL
TGAVGSTSTD LQNLFASGSG AWIFTPNISL PIFDAGRNRS NLELAKAREG EAVAQYEETI
QDAFRDVADA LSARVWLATQ VQAETDTLVA QSERARLARQ RYDNGATPFL EVLDAQRDLL
DARQQLIQTR RALLTSRVAL YAALGGGVQD ADPAPPPSAA DITLKQGPLP
|
|---|
| |