| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2303 |
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| Symbol | |
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| ID | 4007201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 827739 |
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| End bp | 829730 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637950404 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_553034 |
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| Protein GI | 91777826 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.29626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACC CAGCCGCGAG CCGCCCCGCC TTGAGCACAC CTCTTTTCGA ACCCGCCCAG
CGCCCCCGCA TCTGGGCGCT CAGCATCAGC CGCCTGCGGG ATCTGTTTTT CGATATCGCC
GGCGAATATG TGGAACGCGC GGACCTGCGC ATCGTCGCGC ACGGTTTCGA AGACGCCGTG
CGCGAAGTCG AGGCCGCGGG CACGGGTCGT CCGGATGTCG TGATTGCCGG CGGCTCGAAC
GGCGCGTACC TGAAAACGCG CGTGTCGGTG CCGGTCGTGC TGATCGGCCC CACCGGATTC
GACGTGATGC ATGCGCTCGC GCGCGCGCGC CGCGACGGCG CGAAGGTCGC GCTCGTCTCG
CACGGCGATA CGCCCGACGA AGTGCGGCGC TTCTCGGCCG CCTATGCGCT CGACGTCACG
TTCGCTTCCT ATCAATCGGC GCAGGACGCG GAGAGCGTCG TGCTCGATCT GCGCGATCGC
GGCATCGACG TGGTGGTCGG CCCCGGACTC GTCACGGATC TGGCCGCGAA TGCCGGCATG
GGCGCGGTGT TTCTCTACTC GCGCGCGTCG GTGCGCGCGG CTTTCGATAC GGCGCTCGAA
GTCGCCCAGG CCACAAGGCG GGAAACGGTC CGGCGTCAAC GGCTCGACAA TCTGCTACAG
CATCTGCGCG ACGGCGTCGT CGCGCTCGAC GCGCAAGGGC GGGTCGAAGC GATGAACCAG
CGCCTCGCGA GCGTGCTCGG CCTCGACGCG GCGAATGCGG TGGGCCGCGT GCTGCTCGAA
CTCGCGCCCG ATCTCGCGGG CAGCCTGCCG GACGCGGACG GCGACACGTT CTGCACGGTG
CGCGGCGCGA GCTATGTCGT GCATCGCGGG CCGCTTGCCA GCACCGGCTC GGCGGCGGGC
ACCGTGCTGA CGTTTCAGGA ATCGCGCGCG GTTGAACGGC TCGACCGGAC CCTGCGCTCG
CGCCAGCGTG TGCAGCAGTT CAGCGCGCGT TACCGGCTCG CCGATATCGT GGGCGCGTCC
GAATCGATCG AGCGGGTGCG CACGCTCGTC AAACGCTATG CCCGCTCGGA CGCCACCGTG
TTGATCCTCG GCGAAAGCGG CACGGGCAAG GAGATGGTCG CGCAGAGCAT GCATCAGCTG
AGCGCGCGGC GCGACTTCGC GTTCGTCGCG ATCAATTGCG GCGCGTTTCC CGAGGCGCTG
CTGGAGAGCG AACTGTTCGG CTACGAGGAA GGCGCGTTCA CCGGCGCGCG CAAGGGCGGC
AAGGCGGGGC TGATCGAAGT GGCACACCGC GGCACGCTGT TTCTGGATGA AATCGGCGAG
ATGCCGCTGT CGTTGCAAAG CCGGCTTCTG CGCGTGCTGC AGGAGCGCGA AGTGGTACGG
CTTGGTTCGA CGGAGCCCAC ACGGGTCGAT ATTCGCGTGG TCGCGGCGAC GCATCGCGCG
TTGACCGAGG GTATCGAAGC GGGCAGCTTT CGCGCCGACC TGTACTACCG TCTCAACATT
CTGAGCATCG CGCTGCCGCC GCTGCGCGAG CGGCCGACCG ATCTGCTGCC GCTTGCCGTC
GAACTGCTGC TGCAAGCCGC GGCGCGTGAA CCGAGGCTCG CGGGGCGTTT GCCCGACGCG
GCCGCCGCCG AACACCTGCT CGCCGCGCTC GACGAGCCGT TCAGACGTTA CGCGTGGCCC
GGCAACGTGC GCGAATTGCA GAACGTGATC GAACGGATCG CCGTGGAACT CGCAGACGCG
GACGCGCTTC CCCAGGACAG CACCGAAGCC GTTTTCACAC GCGACATGCT GCGCACGGTC
GCGCCGGAAA TCGTCGAGCC CCACGCGCGC GGCAGGAAGG CCGCGCTATC CCTGCGCGAG
CGCAGCCGTC ACGTGGAAGC CGACGAAATC CGCGCCGCGC TCGCCGCGCA CGACGGCGAC
CGCGACGCGG TCTGCGAGGC GCTCGGCATC AGCAAGACGA CACTCTGGCG GAAGCTGAAC
GCGGCGCAGT AG
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| Protein sequence | MSNPAASRPA LSTPLFEPAQ RPRIWALSIS RLRDLFFDIA GEYVERADLR IVAHGFEDAV
REVEAAGTGR PDVVIAGGSN GAYLKTRVSV PVVLIGPTGF DVMHALARAR RDGAKVALVS
HGDTPDEVRR FSAAYALDVT FASYQSAQDA ESVVLDLRDR GIDVVVGPGL VTDLAANAGM
GAVFLYSRAS VRAAFDTALE VAQATRRETV RRQRLDNLLQ HLRDGVVALD AQGRVEAMNQ
RLASVLGLDA ANAVGRVLLE LAPDLAGSLP DADGDTFCTV RGASYVVHRG PLASTGSAAG
TVLTFQESRA VERLDRTLRS RQRVQQFSAR YRLADIVGAS ESIERVRTLV KRYARSDATV
LILGESGTGK EMVAQSMHQL SARRDFAFVA INCGAFPEAL LESELFGYEE GAFTGARKGG
KAGLIEVAHR GTLFLDEIGE MPLSLQSRLL RVLQEREVVR LGSTEPTRVD IRVVAATHRA
LTEGIEAGSF RADLYYRLNI LSIALPPLRE RPTDLLPLAV ELLLQAAARE PRLAGRLPDA
AAAEHLLAAL DEPFRRYAWP GNVRELQNVI ERIAVELADA DALPQDSTEA VFTRDMLRTV
APEIVEPHAR GRKAALSLRE RSRHVEADEI RAALAAHDGD RDAVCEALGI SKTTLWRKLN
AAQ
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