| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2258 |
|---|
| Symbol | |
|---|
| ID | 4007246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 882423 |
|---|
| End bp | 883838 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637950448 |
|---|
| Product | putative sugar transferase |
|---|
| Protein accession | YP_553078 |
|---|
| Protein GI | 91777870 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGG CAATTCGTCA ACCCGCCGGC CGGAATTTCG CGGACGTGGA CAGCATGCTG
GCTCGTCTGC TCGACGTGAT GCTCATCGCG TTGGGCGCGG CGCTGGCCTC GTTCGCGCTT
ACGCCCCACG CAGGGCTGTC GATTTTCGAG GGCGCTTTCG TCGCGTTCGA CATGGCCTTC
GCCATTTTGC TGCTGCCGTG GTTCGGCGTG TACGACTCAT GGCGTGGCCG CTCGAAATGG
CGTTTGGCTA CCAACATCGT ATTCGGCTGG ATCGCGGTGC AGATTTGCGG TCTTGCCATG
TTGTTCCTGC TTCACCGTGC CGCGTCGGTG TCCCGCCTGT GGTGCGTGAG TTGGACCGCG
ATCACGGCGG TCGGGCTGGT CGCTTCGCGG CTTCTGGTGC ACGCGGTTCT CGGCCGCCTG
AGGCGTGCGG GCGGGAATCT GCGGTTGGTG GCGGTGGTGG GTGCCGGCGC GCATCGCGAC
CGGGTAATCG CCAATATCGT GCGCTCGCCG GACGCGGGCT TCCGGGCGGT TGCGACTTTC
AATACGCGGC AGGCGCGTGA GTGCGATTTT CCCGGCTTGC CGTCGTTCGG GCGTCTGCGG
GAATTCGCGG AGTGGGTGCG CCGCGAACAG ATCGAAGAGG TCTGGCTCGC GTTGCCGATG
TCAGAAGAGG ACACCGTATT GCGGATCCTC GACGAATTCA GCGGCGACCT CGTGAATTTG
CGCTTCATTC CCGACGTGCG CAGCCTCGCG ATGTTCGATC GCAACGTGAT CGATCTGGTC
GGTGCGCCGG CCATCAATCT GATGGCTTCG CCAATGACAC CGTATGCCCT GATCCAGAAG
GCGCTTTTTG ACCGGCTGTT TGCGGCTGCG GCATTGCTTG CGCTGACGCC CGTGATGCTT
TCGATTGCGG TTGCCGTCAA GGTGACTTCG AAGGGGCCGG TGCTGTTTAC CCAGCGGCGC
AAGGGCGCGG ACGGGCGCGT CTTTCGCATT TACAAGTTTC GTTCGATGCG CGAGCACGCG
TCGCGGCCCG GTGTGGTTCG CCAGGCCACG CGAGGCGATC CGCGTGTCAC GCGCGTGGGA
GCGTTCCTGC GTCGTACGAG CCTCGATGAG TTGCCGCAGT TTCTGAATGT GCTGCGCGGA
GAAATGTCGG TAGTGGGACC ACGGCCGCAC GCGATCGAAC ACGACGACCA GTACCGGAGC
ATCGTCGACG GGTATATCCA TCGCTACCGG ATCAAACCCG GCATTACAGG ATGGGCGCAG
GTGAATGGCT TTCGCGGTGA GACGGACCGG ATCGAAAAGA TGCAGGCGCG CGTGGAGCAC
GATCTGTACT ACTTGCGCAA CTGGTCGTTT GGATTGGATA TGCGCATCGT TTTTGCAACG
GTGGTGAGGG GGTTGCGGCA TCGGAATGCG TATTGA
|
|---|
| Protein sequence | MRTAIRQPAG RNFADVDSML ARLLDVMLIA LGAALASFAL TPHAGLSIFE GAFVAFDMAF
AILLLPWFGV YDSWRGRSKW RLATNIVFGW IAVQICGLAM LFLLHRAASV SRLWCVSWTA
ITAVGLVASR LLVHAVLGRL RRAGGNLRLV AVVGAGAHRD RVIANIVRSP DAGFRAVATF
NTRQARECDF PGLPSFGRLR EFAEWVRREQ IEEVWLALPM SEEDTVLRIL DEFSGDLVNL
RFIPDVRSLA MFDRNVIDLV GAPAINLMAS PMTPYALIQK ALFDRLFAAA ALLALTPVML
SIAVAVKVTS KGPVLFTQRR KGADGRVFRI YKFRSMREHA SRPGVVRQAT RGDPRVTRVG
AFLRRTSLDE LPQFLNVLRG EMSVVGPRPH AIEHDDQYRS IVDGYIHRYR IKPGITGWAQ
VNGFRGETDR IEKMQARVEH DLYYLRNWSF GLDMRIVFAT VVRGLRHRNA Y
|
|---|
| |