| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2223 |
|---|
| Symbol | |
|---|
| ID | 4007281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 920549 |
|---|
| End bp | 922672 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637950483 |
|---|
| Product | putative D-(-)-3-hydroxybutyrate- oligomer hydrolase |
|---|
| Protein accession | YP_553113 |
|---|
| Protein GI | 91777905 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0731014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG TTTTCAAAGT CAGATCCGCG TCAGGACATG TGCCCGTGGT GCGAACCCTA
GCGGCCATGA TGGCCGTGAC AGTCGTGCTG ACTGCCTGCC ACGGCGGCGG TGACAATCAT
CCGCCGCCGC AGGCCAATGT GCTGCCGGCT TTTATTACCG CTTCTTCGGT AAGAACCCAG
TTCTACGATG GCAACACCGA CGACCTGCTC ACCGCTGGCC TCGGCAAGAC CGGACTCGCA
TCGGCCACGG CGCCGGCCAT TGCCAACGCG GCGCAACCCA CTGCCGCCGA ATTGCGGCGG
CTTGCCATCT GGTCGAACTA TCGCGCGCTC GTCGACATGA CCGCGAACGG CGGCTATGGA
CGCTTCTGGG GACCCAATGT CGATCTGAAC GGCAACGATA CGCTCGGCGA AGGCAAGATC
GCCGGCAAGG AATACCTCGC CTTCGCCGAC GACGGCAGCG GCACGCAGAA CGTCACCGTG
CTGGTGCAGA TTCCGGCGAG CTTCAACCCG GATCAGCCGT GCATCGTCAC GGCAACGTCG
TCCGGTTCGC GCGGCGTGTA CGGCGCGATT TCTGCGGCCG GCGAGTGGGG TCTCAAGCGC
GGCTGCGCGG TGGCCTACAC CGATAAAGGC AGCGGCAACG GCGCGCATGA ATTGTCATCC
AGCCTGGTCA CGTTGATCGA CGGCACCTTG CAGAACGCTA CCGCGGCGGG CAAGGCCAGT
CTTTTCACGG CCAACCTCGG CAACACGGAT CTCGCGTCTT ACAACAGCAG GTTCCCGAAT
CGCTACGCGT TCAAGCACGC GCACTCGCAG CAGAATCCGG AGAAGGATTG GGGCAGGAAT
ACGTTGCAGG CAATCCAGTT CGCGTACTGG GCGCTCAACG ATTCTTATGG CACGCTCAAC
GGCTCGACGC GTAATGTGCG TTACACGAGC GGCAGCATCA CGACTATCGC GGCTTCGGTG
AGCAACGGCG GCGGCGCGTC GCTCGCGGCG GCGGAACAGG ACACGTCCGG TTTGATCACG
GCGGTGGTCG TGGGCGAGCC GCAGATCAAT TTGCGGCTGC CCGCGCAGGT CTCGGTGGCG
CAGGGCGGCG TGCCGGTCGG CGCATTCGGC AAGCCGCTCG CCGACTACAT GACGCTCGCC
AACATGCTGC AACCGTGCGC GGCGCTCGCG CCCGCTGCGG CCGGCGCGCC GTATCTGACG
GCGTTGCCGG GTGCCACGAC CACCTCGATT CGCACTGCGC GATGCGCGTC GCTGGCGGCC
GCCGGTGTGA TCGCGGGTGC GGACGCGACG ACCCAGGCGA CCAACGCGCT TGCGCTGCTG
CATCAGAACG GCTACCAGAC CGACTCCGAC CTGCTGCAAG CGCCGATGTG GGACTCGCAA
GCGGTGCCGG CCGTCGCCGT GACCTATGCC GACGCGTACG CAAAAGCGAG TGTCACCGCG
AACCTTTGCA ACTTCAGCTT CGGCACGACG AATGCGGCTG GAACCGCCGG CGTCACACCC
GCGGTGTCGC CGATGCTTAC GGTGTTCGGC AACGGCAACG GGGTGCCGCC GACCAACGGC
ATCAACCTCG TCTTCAACTC GGGCGCGGGC GCGGCGGATC ACCGGCTGGC GACCGCCGAC
GGCAGCTATG CGGGCGCCTC GTGTCTGCGC ACGCTGTGGA CGAACGGCAC GCTGACCGGC
AGCGTCGACG CTATTCGCGT GAATGCGAAT CTGCATGGCA AGCCTGCCAT CATCGTGCAG
GGCCGCGCGG ATGCGCTGGT GCCGATCAAC CACGCGTCGC GTCCGTATCT CGGCTTGAAT
CAATTGAGCG AAGGCGCGGC GAGCAGGCTG TCGTTCTACG AAGTGACGAA CGCCCAGCAT
TTCGATGCGT TCCTTGGCGT GGCGGGCTTC GATTCACGCT TCGTGCCGCT GCATTACTAC
AACCTTCAGG CGCTCAATCT GATGTGGAGT CATCTGAAAA ACGGCACGCC GCTGCCGCCA
TCGCAGGTGA TTCACACCGT GCCGCGCGGC GGCACGCCCG GCGCCGCGCC GGCGCTGACC
ACGGCCAATC TGCCGCCGAT CGTGGCGAGT CCGGGCATTA ACGCGATCAC GGCGGCCAAT
GGCGCGGTGA ATGTGCCGAA CTGA
|
|---|
| Protein sequence | MASVFKVRSA SGHVPVVRTL AAMMAVTVVL TACHGGGDNH PPPQANVLPA FITASSVRTQ
FYDGNTDDLL TAGLGKTGLA SATAPAIANA AQPTAAELRR LAIWSNYRAL VDMTANGGYG
RFWGPNVDLN GNDTLGEGKI AGKEYLAFAD DGSGTQNVTV LVQIPASFNP DQPCIVTATS
SGSRGVYGAI SAAGEWGLKR GCAVAYTDKG SGNGAHELSS SLVTLIDGTL QNATAAGKAS
LFTANLGNTD LASYNSRFPN RYAFKHAHSQ QNPEKDWGRN TLQAIQFAYW ALNDSYGTLN
GSTRNVRYTS GSITTIAASV SNGGGASLAA AEQDTSGLIT AVVVGEPQIN LRLPAQVSVA
QGGVPVGAFG KPLADYMTLA NMLQPCAALA PAAAGAPYLT ALPGATTTSI RTARCASLAA
AGVIAGADAT TQATNALALL HQNGYQTDSD LLQAPMWDSQ AVPAVAVTYA DAYAKASVTA
NLCNFSFGTT NAAGTAGVTP AVSPMLTVFG NGNGVPPTNG INLVFNSGAG AADHRLATAD
GSYAGASCLR TLWTNGTLTG SVDAIRVNAN LHGKPAIIVQ GRADALVPIN HASRPYLGLN
QLSEGAASRL SFYEVTNAQH FDAFLGVAGF DSRFVPLHYY NLQALNLMWS HLKNGTPLPP
SQVIHTVPRG GTPGAAPALT TANLPPIVAS PGINAITAAN GAVNVPN
|
|---|
| |