| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2186 |
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| Symbol | |
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| ID | 4007318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 961615 |
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| End bp | 963429 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637950520 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_553150 |
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| Protein GI | 91777942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.419483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.336027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCC CCGGGCTGAC CTTCAAGTTA TCCGTGCTGC TCGCGTGCAT TGGCGTGCTC
GCATCCGGCG CGACCGGCTA CTACGCCTAT CATGCCAACC GCGCGATGCT CGTGAACGAG
GCCGGGCGCA GCCTGCTCAC ATCGACGGAA TTGCTGGGTC AGCGTTTCTC CGCCTCGATC
GACGATATCG GCGCGGACGT GCTGGTGCTC GCGAGCATGC CGTCCACGGC GGAGGTCGCG
CAAAGCGACG ACGGTGTCGG CCCGAACGCG GCGCGCGAAC GGCTCGCGCA GGTGTATTCG
AGTTTCATGG TTCACCACCT CGAATACCTG CAAATCCGGC TGATTACGCG CCAGCATTAC
GGGCTCGAAC TGGTCCGCTT CGACCGCGAC TCCGACGGCC TCGTGCGGGT GGAAGGGGGC
AACCTGCAGG AAAAAGGTCA GTTCGCCTAT GTGTTCGACA CGCTGACGTT CGCGCCGGGC
CGCATTTACA CCTCGCCGAT CTCCGTCAAC CACGAGTACG GAACGCATGC GGCGCAGGGC
AAGCCGACGC TGCGGCTCGG CACGCCGGTG TCGAACGCGA ACGGCGTGGT GGTAGGCGTG
GTCGTGATCG ATATCGATCT GGCGGTTCTG CTCAAGCGGC TGCAAAGCGA TTTGCCGAGC
GACTATCAGG TCTATCTGGC CAACGAGTGG GGCGATTTCC TCGTTCATCC CGATGCCTCG
AAAACCTTCG GCTTCGATCG GGGCCGGCGC GTGCTGATGC AGGACAGTTT CTCCGTCACG
AGGCCGCTCT TCGAACAGTC GCGGGGCGAG GTGCTTGCAA ACGGTCTTGC GCAGCCGCGG
CAGGCCGCCG GCCAGGTGCT GGCTTTCGTG CGCAGGCCGT TCGGCGATCT GGAGGGCAAC
CGCTTTATCG TACTCGGTCT CGCCAAGCCG CTCGAAGACG TCCTGTCCGG CGCGAATCTG
CTCGGCAACC AGATCGTGCG CATGGTGCTG ATTTTCAGTG TGCTCGCGCT GATTCTCGCC
ATTCTGTTCG CGCGCGCGCT GACCAAGCCG CTGCACATTC TCGCGCACGC GGCGACGCAT
CTGTTCGCCG AACACACCAT GCATACGCTG CCGCTCAACC GCACCGACGA GATCGGCGTG
CTGGCGCGCT GCTTCGAGCG GCTGCGCCGC GAGATCAAAT CGCAAATGGA TGTGCTGCAC
GCCAAACAGC GTGAGCTCGT GCATCTCGCC ACGCACGACG TGCTGACTGG CCTGCCGAAC
CGCGTGCTGT TCATGGAGAA GCTCGAAAAC GCGATCGACG AAGCGATGCG GCGTCAGGAA
CGCCTCGCCG TGCTGTTCGT CGACCTCGAC CGCTTCAAGC AGATCAACGA TCAGTTCGGC
CATTCCGTCG GCGACAAGGT GCTCGCCACG GTGGCGCACC GCCTGAAGCA GGTGCTCTGG
TCCGAGGACG TGGTGGCGCG TTTGGGCGGC GACGAGTTCA TCGTGTTGAT CGAAGGGCCG
CGTTCGGGAG AAGCGGCGCC TGCGATCGCC TCGCGCATCA TGGCGACGTT GAATGAAGAA
GTGCGGGTAG ACGGGCAAAG CATGACGGTG GGCGCGAGCA TTGGCATCAG CCAGTTCCCC
GAGGACAGCG GCACGGCGGA GGAACTGTTG CTGAACGCGG ACGCGGCCAT GTACGCGGCC
AAATCCGGCG GACGCTGCGC GTATATGCGT TACCACGATG TGCTCGAAGC GCGCCGGCGG
GGACAGGCTG AACAAGCCTG CATGCGCGCC GGCGAAGGCG CGCCGGAAGG ACACGAGGCC
GAGCCGACTG CCTGA
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| Protein sequence | MIRPGLTFKL SVLLACIGVL ASGATGYYAY HANRAMLVNE AGRSLLTSTE LLGQRFSASI
DDIGADVLVL ASMPSTAEVA QSDDGVGPNA ARERLAQVYS SFMVHHLEYL QIRLITRQHY
GLELVRFDRD SDGLVRVEGG NLQEKGQFAY VFDTLTFAPG RIYTSPISVN HEYGTHAAQG
KPTLRLGTPV SNANGVVVGV VVIDIDLAVL LKRLQSDLPS DYQVYLANEW GDFLVHPDAS
KTFGFDRGRR VLMQDSFSVT RPLFEQSRGE VLANGLAQPR QAAGQVLAFV RRPFGDLEGN
RFIVLGLAKP LEDVLSGANL LGNQIVRMVL IFSVLALILA ILFARALTKP LHILAHAATH
LFAEHTMHTL PLNRTDEIGV LARCFERLRR EIKSQMDVLH AKQRELVHLA THDVLTGLPN
RVLFMEKLEN AIDEAMRRQE RLAVLFVDLD RFKQINDQFG HSVGDKVLAT VAHRLKQVLW
SEDVVARLGG DEFIVLIEGP RSGEAAPAIA SRIMATLNEE VRVDGQSMTV GASIGISQFP
EDSGTAEELL LNADAAMYAA KSGGRCAYMR YHDVLEARRR GQAEQACMRA GEGAPEGHEA
EPTA
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