Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2122 |
Symbol | |
ID | 4007382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1026425 |
End bp | 1027894 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637950584 |
Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
Protein accession | YP_553214 |
Protein GI | 91778006 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.510942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCTGA CTCTGCTCTC CGCCGCCATG CTGGTGGCGA TCACACTCGT GGGAGTGCTC GGGCTGCGGC GCTTCCCGGA CAAAGTCCGG ATCACGTTCG ACGTCTGCTG TTTTCTCGTC ATCAGTTTCT ATTTTCACAA ACAGGGCATC TTCTTTCCGG TCTTCCCGCC CTTACCCGAT CATGCCGACA GCGGAGCGCT GTGGCTGCGG GCGATAGGCG GCGCCTGGTG GCTGCTGGGT TCGCGCATCG TGGTCGCCGG CCTCTGGTTC GCACTCCATC GCGACCGGCG CTCGCGCGGG GCCCGGCTTT TCTCGGACCT GTTCGCTGCC GCTATTTATA TCGCGACCGC CGCGATCGTG CTGAACTCGG TCTTCGCGCT GCCGATTACC GGCGTGGTCG CCACTTCCGG CGTCGTGGCG ATCGTGCTCG CCCTCGCACT GCAGAACACA TTGGCGGACG TCTTTTCCGG CATCGCAGTC GGCATCGAGG CACCGTTCGG CGTGGGAGAT CGAATCCAGA TCGCAGACAA GATCGAAGGC GTCGTCGCGC AGATCAACTG GCGGTCGATC CGGATTCACA CGGATGGAGA CGACATGGCC ATCATTCCAA ATAGCCTGAT TGCCAAGGCC GAGATCGTCA ACCGAAGCAG TCCGAGCCAA CGCAGGGCCG CATCCGTGGA GATTACCTGC CCCGAAAGTG CGGTTCCGGA ACGCGTTATC GAAACCCTGC TTCACGCGAC ACTGCTGTGT CCGGATATTC TTTCGGTGCC CGCGCCGAGT GCCGTGCTCA CTCAACTCGG TGCAAGGCGC AATGCCTACA AGATTTCCTT TTTCGTCGGC AACACGCGCC ACCTTTCTTC CACCAAAGAC ATCCTGCTGC GGGCCGCGCG CCGTCAACTG CACTATGCCG GCTTTCTCGA CCAGGACCGC CGGGACGACA CAGCAACCCC CAACCTCTCC GATGAGGCGC TGACGGTTCG CAGACTGCTT CGCGACATCA CCCTGTTCGA GTGCCTCGAC GAGCGGCAAC TCGACAGTCT TGCCGATCTT TTCGAATTGC TCCGGCTCGA ACCCGGAGAG GCGCTTTTCT CTGAAGACAC AGCGGACGCC GCGCTCTACA TGGTAGCCGC GGGGATCCTG GAATTGACGC GAAAATCCGG AGCCGTAGCC GGGACGGTCG ACTGCATTGG CGCCGGCGAA TATGTCGGCG AGATCGGCAT GCTCACCGCG GCGCCGCACG CGGCTACCGG AGTCGCACGC ACCCATTGCA GAATCTACCG GCTTCCGCGC GAAGCGATCG CACCCCTGCT GGCAAAAAAC ACGGAACTGG CGTTTGCTTT CGACAAGTCG GTACGCCGTG GAATGGAGAT ACTCCATCGT GAGGTAGCCG TTCGTGCGTC GCCCGACATC GGTCCGCAAG GGCAATTGCT ACAGCGAATC CGGAGCATCT TTCATTTCGG CTCCGATTGA
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Protein sequence | MNLTLLSAAM LVAITLVGVL GLRRFPDKVR ITFDVCCFLV ISFYFHKQGI FFPVFPPLPD HADSGALWLR AIGGAWWLLG SRIVVAGLWF ALHRDRRSRG ARLFSDLFAA AIYIATAAIV LNSVFALPIT GVVATSGVVA IVLALALQNT LADVFSGIAV GIEAPFGVGD RIQIADKIEG VVAQINWRSI RIHTDGDDMA IIPNSLIAKA EIVNRSSPSQ RRAASVEITC PESAVPERVI ETLLHATLLC PDILSVPAPS AVLTQLGARR NAYKISFFVG NTRHLSSTKD ILLRAARRQL HYAGFLDQDR RDDTATPNLS DEALTVRRLL RDITLFECLD ERQLDSLADL FELLRLEPGE ALFSEDTADA ALYMVAAGIL ELTRKSGAVA GTVDCIGAGE YVGEIGMLTA APHAATGVAR THCRIYRLPR EAIAPLLAKN TELAFAFDKS VRRGMEILHR EVAVRASPDI GPQGQLLQRI RSIFHFGSD
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